Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g02718 ATGGGTGTGGACTACTATAACATTTTGCGGGTTGACAAGAATGTCACGGAGGAAGATTTGAAGAAAGCTTACAAAAAGCTTGCCTTGAAATGGCACCCCGACAAGAATGCGACCAATAAGAAAGAGGCTGAGACTAAGTTCAAGCAGATATCTGAAGCCTACGAGGTTTTGAGTGATCCCAAGAAGAGAGCAATTTATGATCGGTATGGAGAAGAAGGGCTGAAAGGGCAAGTACCGCCTGCAGATGCTGATGGGCCAACGTTCTTCCAAACTGGGGATGGTCCAACAGCATTCAGGTTCAATCCAAGAAACGCAGATGACATTTTTGCTGAGTTTTTCGGGTTTTCAAGCCCAAGCCCATTTGGTGGTGGTGGTGGTGGTGGTGGTGGCATGAGGGGTGGTTCCTTCGGTGGAGTTTTTGGCGATGATATATTTGGTTCATTTGGAGGAGGAAGGCCAATGAAACAGGGTCCACGCAAGGCACCTCCTATAGAGAAGAGGTTGCCTTGCACCCTTGAAGAGCTCTATAAGGGCACTACCAAAAAAATGAAGATCTCAAGGGAGATTGCTGATGCAAGTGGGAAGACATTACCTGTGGAGGAAATATTGACCTTGGAAATTAAACCAGGGTGGAAGAAGGGGACAAAGATCACATTCACAGAGAAAGGAAATGAGCAGCCAAATGTGATTGCTTCGGATCTTGTGTTTGTTATTGATGAGAAACCTCACCCAGTGTTTACTAGAGATGGTAACGATTTGGTTGTAACACAAAAAGTGTCACTTGCAGAAGCTCTTTCGTGTTACACTCTCCATCTTACAACACTAGATGGCAGGGTTCTAAACATTACCATTAACAATGTGATTCATCCAAACTATGAAGAGGTGGTCCCCAGGGAAGGGATGCCCATTTCAAAAGACCCTTCAAAGAAAGGTAATCTTAGAATCAAATTCAAGATCAATTTCCCAGCAAAGTTGACATCAGAGCAAAAGGCCGGAATTAAGAAGCTGCTGCCACATTGA 1020 0.4461 MGVDYYNILRVDKNVTEEDLKKAYKKLALKWHPDKNATNKKEAETKFKQISEAYEVLSDPKKRAIYDRYGEEGLKGQVPPADADGPTFFQTGDGPTAFRFNPRNADDIFAEFFGFSSPSPFGGGGGGGGGMRGGSFGGVFGDDIFGSFGGGRPMKQGPRKAPPIEKRLPCTLEELYKGTTKKMKISREIADASGKTLPVEEILTLEIKPGWKKGTKITFTEKGNEQPNVIASDLVFVIDEKPHPVFTRDGNDLVVTQKVSLAEALSCYTLHLTTLDGRVLNITINNVIHPNYEEVVPREGMPISKDPSKKGNLRIKFKINFPAKLTSEQKAGIKKLLPH* 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g02718 339 ProSitePatterns Nt-dnaJ domain signature. 47 66 IPR018253 -
Phac3g02718 339 CDD DnaJ 4 59 IPR001623 -
Phac3g02718 339 Pfam DnaJ C terminal domain 164 322 IPR002939 -
Phac3g02718 339 SUPERFAMILY HSP40/DnaJ peptide-binding domain 245 331 IPR008971 GO:0006457|GO:0051082
Phac3g02718 339 PRINTS DnaJ domain signature 62 81 IPR001623 -
Phac3g02718 339 PRINTS DnaJ domain signature 6 24 IPR001623 -
Phac3g02718 339 PRINTS DnaJ domain signature 42 62 IPR001623 -
Phac3g02718 339 PRINTS DnaJ domain signature 24 39 IPR001623 -
Phac3g02718 339 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 1 338 - -
Phac3g02718 339 SMART dnaj_3 3 62 IPR001623 -
Phac3g02718 339 FunFam Dnaj homolog subfamily b member 160 241 - -
Phac3g02718 339 Pfam DnaJ domain 4 67 IPR001623 -
Phac3g02718 339 SUPERFAMILY HSP40/DnaJ peptide-binding domain 158 253 IPR008971 GO:0006457|GO:0051082
Phac3g02718 339 SUPERFAMILY Chaperone J-domain 3 75 IPR036869 -
Phac3g02718 339 FunFam DnaJ subfamily B member 13 243 323 - -
Phac3g02718 339 Gene3D - 243 323 - -
Phac3g02718 339 ProSiteProfiles dnaJ domain profile. 4 70 IPR001623 -
Phac3g02718 339 Gene3D DnaJ domain 3 122 IPR036869 -
Phac3g02718 339 FunFam DnaJ subfamily B member 13 3 124 - -
Phac3g02718 339 CDD DnaJ_C 162 325 - -
Phac3g02718 339 Gene3D - 163 241 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g02718 Phac-Chr3 29593793 29595865 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g02718 5 69 C2H2 Transcription Factor Family AT1G74250 39.130 1.27e-09 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g02718 K09510 - gmx:100775897 521.161