Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g02717 ATGGATGCAACTCGTGTCTCTCACAGCCTTGGCGATCCCAAAATTCGTCGAGTAGGTTTCTTTGTTCCAGAATCCTCCACCACCGACTCTTACAAGGTTCTGTCGCCACGTCATCTTTCCGGGACGCTCCCGGATATGCAGACTTCCGTCGATGGCCAAGTGTCATCTCAGAGCTATGATGCCTCGGAAAACCTAAATCTTGAAACTGGCATTGAAAAGAGGGAAGAGGGAGAGAAAAAGGTTCTGAAATCGAGGTCAAAGCCACTGAAAGAAAAAACTACTAAGGCAGAGAGACGAGCCTTGCAGGAAGCACAGAGAGCTGCTAAAGCTGCTGCTTCTAAAGATGAGGGAAGTAAGGCTGTTGCTGAAACTGGTGGAGCTGCCACGGGTAGAAGTACAAAACAGTCTTCTCAAAAGAAAGTTGGTCCTTCATCTCCACTGGCTGCTGATAAAAAAGCAGGAGACCGTCCTTTGGATAAAGACAGGAAAAAGGATGCTCCTCCTCCACGAATGCAATTTGATGATGAAAGCCGAATGGAAAAGGCTAGAAGGCGTGCAGTAGTCAATCCAACTGAATCTAGAACCAGAGTTGAATTATTTAAGCATTTGCCTCAATACGAACATGGGACTAAGCTTTCTAATCTTGAATCAAAGTTTTTCCACCTTGGTTTAGTGCACCCTTCTGTATTTGAGGTAGGACAGCGATATTTGGCAGGGGATATATGGGGGGGTAATGCTCGTTGTGTAGCAATGCTAAGAGCACTTCAAGATGCCATTAGAGATTACTGCACAGATAATGAAAAGACCCTTGTTAGGGATTTAACTTCAAAAATCAACAGTTGTGTTTCATTTTTTACTGAATGCAGACCACTTTCTATGAGCATGGGAAATGCAATTAGGTTTGTAAAGAGTCGTATTGTCAACCTGTCTACGAATCATTCCGAGTTTGAGGCAAAAAGAACCTTGTGTTCAAATATTGACCGGTTTATAAATGAAAAAATAATTCTTGCTGATAAGGTGATTGCCCGACATGCTTTTACAAAGATTAAGGATGGGGATGTGCTTCTCACGTATGGATTGTCGTGTGTTGTTGAGATGATTCTTTTATATGCCCATGAACTTGGAAAACATTTCCGTGTTGTTGTGGTAGATTCCCAGCCAAGACTTGAAGGTCAGGTCTTGCTTCGTAGGCTAGTGGCTAAGGGTCTGAGTTGCACATATACTCATATCAATGCTGTTTCTTATATAATGCATGAGGTCACACGAGTTCTTCTGGGAGCTTCTGCAGTTTTGTCTAATGGAACTGTATATTCAAGAGTTGGGACTTCTTGTGTTGCAATGGTGGCTCATGCATTTCGTGTTCCTGTATTGATCTGTTGTGAAGCATATAAATTTAATGAAAGGGTGCTACTGGATTCAATATGTTCTAACGAACTAGGTGACCCAGATGCTATTGCTAGGGTTCCTGGACGAATGGATGTCAATTATCTAGATAATTGGGCCAGTGAAGACAATTTGAGGCTTTTGAATTTGATGTATGATGCTACTCCTTCAGATTATGTCACGGTTATTGTAACAGATTATGGTATGCTTCCTCCTACAAGCGTGCCTGTAATAGTACGTGAATATCGACGAGAGCATTTGTTGATGTAG 1653 0.4235 MDATRVSHSLGDPKIRRVGFFVPESSTTDSYKVLSPRHLSGTLPDMQTSVDGQVSSQSYDASENLNLETGIEKREEGEKKVLKSRSKPLKEKTTKAERRALQEAQRAAKAAASKDEGSKAVAETGGAATGRSTKQSSQKKVGPSSPLAADKKAGDRPLDKDRKKDAPPPRMQFDDESRMEKARRRAVVNPTESRTRVELFKHLPQYEHGTKLSNLESKFFHLGLVHPSVFEVGQRYLAGDIWGGNARCVAMLRALQDAIRDYCTDNEKTLVRDLTSKINSCVSFFTECRPLSMSMGNAIRFVKSRIVNLSTNHSEFEAKRTLCSNIDRFINEKIILADKVIARHAFTKIKDGDVLLTYGLSCVVEMILLYAHELGKHFRVVVVDSQPRLEGQVLLRRLVAKGLSCTYTHINAVSYIMHEVTRVLLGASAVLSNGTVYSRVGTSCVAMVAHAFRVPVLICCEAYKFNERVLLDSICSNELGDPDAIARVPGRMDVNYLDNWASEDNLRLLNLMYDATPSDYVTVIVTDYGMLPPTSVPVIVREYRREHLLM* 551
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g02717 550 MobiDBLite consensus disorder prediction 39 65 - -
Phac3g02717 550 Pfam Initiation factor 2 subunit family 243 533 IPR000649 GO:0044237
Phac3g02717 550 MobiDBLite consensus disorder prediction 128 143 - -
Phac3g02717 550 MobiDBLite consensus disorder prediction 67 113 - -
Phac3g02717 550 SUPERFAMILY NagB/RpiA/CoA transferase-like 226 543 IPR037171 -
Phac3g02717 550 MobiDBLite consensus disorder prediction 39 190 - -
Phac3g02717 550 MobiDBLite consensus disorder prediction 152 190 - -
Phac3g02717 550 PANTHER TRANSLATION INITIATION FACTOR EIF-2B 68 547 - -
Phac3g02717 550 Gene3D - 337 543 IPR042529 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g02717 Phac-Chr3 29573291 29577913 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g02717 65 550 Eukaryotic Initiation Factors Gene Family AT5G38640 65.173 0.0 653
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g02717 K03680 - gmx:100795256 853.588