Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g02705 ATGTATTCCTCAAATACCTCCCTCAACGGCAATGACCTACTCTCGTACCCTAACCAACCATTTTGCTTTAGGCCTTTTTCCTTTGAAAGCAACCCAACCAATTCCTCAAAAGACCAATCCAATTCCAATTACGCCCTTCCTCCTCCTCTTCCTCCTCCTTTCTCCTTTCTCCAATCCTTTGACGAAAATATCTTTCTCGAACACCACCATGACCTCCTCTTACTTCACCAGTCTCTAGCTGACCCCGGAATCTCCAGAAACCTCGACGTTGCTGCCGAAATCGCGCCAATTCCTTGCTCTGGACAAGGTGGCAATTCCTTCCTCGATGTCCCTATGGAGCACACTGCCAGGAAGAGATCCAGCAAGAGAGATCGTCACAGCAAAATCAACACCGCACGAGGCCTCAGAGACCGAAGAATGAGGTTGTCCCTCGAAGTTGCAAAGAGGTTCTTCGGGTTGCAAGACATGCTAGGCTTTGACAAGGCCAGCAAAACCGTTGAGTGGCTACTAAACCAAGCAAAAGTTGAAATCAAACAACTTGCAAGGGAAAAAAACAGTGCTGGTGGTGCCAAGGGTGCATCGTCAACTTCTGAATGCGAAGGGGTGTCTAGCTTGGACGAGGTTGCAGTGAGTGGAGTTAACGAGGAGCAAGAGAGGGAGACACCCAACATGAAGAGAAGAACAAGTAAGGTTTGTAGAAAGACTGCATTCAATACTACGGATAAGGAATCGAGGGAAAGGGCAAGAGAAAGGGCGAGAGAAAGAACAAGAGAGAAGATGAGGAGTCGGAGACTACTTGCTGCAGATGCTTCAAACCTGAACCCTTTGAGTTCTTGGAACCCCTTTGAAACGGTTGAAGATTCTCCGGGTACTCAGAGCCAAAGCGTGAACCACCCCTCCTTGGATGTGCACCTTCCTGAGCCTGAAGAACTAACTTCTCACGCAAAGGAACATTTGGGCACCGTGGAGGACATAGCGCGGCATGAAGTTAATTCTTTCGTGATCATGAACAAGTGGAGCCCAACCATGGTATTCAATTCTCTCAACAACTCAGCAATCCTTCACGAACATCAATTTGCGGAATTTCAGTCCTTCGGAAAACCTTGGGAAGCCTACAACGATCACATCTAG 1131 0.4792 MYSSNTSLNGNDLLSYPNQPFCFRPFSFESNPTNSSKDQSNSNYALPPPLPPPFSFLQSFDENIFLEHHHDLLLLHQSLADPGISRNLDVAAEIAPIPCSGQGGNSFLDVPMEHTARKRSSKRDRHSKINTARGLRDRRMRLSLEVAKRFFGLQDMLGFDKASKTVEWLLNQAKVEIKQLAREKNSAGGAKGASSTSECEGVSSLDEVAVSGVNEEQERETPNMKRRTSKVCRKTAFNTTDKESRERARERARERTREKMRSRRLLAADASNLNPLSSWNPFETVEDSPGTQSQSVNHPSLDVHLPEPEELTSHAKEHLGTVEDIARHEVNSFVIMNKWSPTMVFNSLNNSAILHEHQFAEFQSFGKPWEAYNDHI* 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g02705 376 MobiDBLite consensus disorder prediction 212 227 - -
Phac3g02705 376 MobiDBLite consensus disorder prediction 236 262 - -
Phac3g02705 376 MobiDBLite consensus disorder prediction 276 297 - -
Phac3g02705 376 Coils Coil 170 190 - -
Phac3g02705 376 ProSiteProfiles TCP domain profile. 122 180 IPR017887 -
Phac3g02705 376 Pfam TCP family transcription factor 121 262 IPR017887 -
Phac3g02705 376 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 114 373 IPR005333 GO:0003700
Phac3g02705 376 ProSiteProfiles R domain profile. 242 259 IPR017888 -
Phac3g02705 376 MobiDBLite consensus disorder prediction 183 262 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g02705 Phac-Chr3 29491222 29493633 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g02705 118 256 TCP Transcription Factor Family AT3G18550 43.671 2.79e-27 110
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Phac3g02705 TCP 7.1e-45 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g02705 - - vra:106767828 580.096
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac8g00309 8 1849616 1852205 Phac3g02705 3 29491222 29493633 ECH
Phac3g02705 3 29491222 29493633 Phac3g02705 3 29491222 29493633 ECH