Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g02686 ATGTCATCAAGTGGAACCCTTTGGAGCTATGAGGAAGAAAAAGCATTTGAGAATGCCATAGCTATGCATTGGATTGAGGAAGCCTCAAAAGAGCAATGGGAGAAAATTGCTTCAGCAGTTCCCAGCAAAAGCATGGAAGAAGTGAAGCAGCATTACCAGGTTCTAGTAGAGGATGTAAGTGCAATAGAGGCAGGTCACATACCATTCCCCAACTATGCTTATGAGGAAACCACATCTTCAAATAAGGACTTCCATGGCTCTTCCAAGGCCTCAAGTTCAGATAAAAGATCAAATTGTAATTATGGAAGTGGTTTTTCTGGATTAGGCCATGACTCCACCACTCACAGTAGTGGCAAAGGAGGCTTGTCAAGGTCATCAGAACAAGAAAGGAGAAAAGGAATTCCGTGGACTGAGGAGGAGCACAGGTTATTTTTACTTGGTCTAGACAAGTTTGGAAAAGGAGATTGGAGAAGCATTTCAAGGAACTTTGTGATATCTAGGACTCCCACACAAGTGGCAAGCCATGCACAGAAGTACTTCATAAGGTTGAATTCTATGAATAGGGACAGAAGGAGGTCTAGTATCCATGATATAACTAGTGTCAACAATGGAGATGTGGCTAGTAGTCAGGCACCAATTACAGGGCAGCATAGTAGCACAGTTTCTTCAAGTACAATGGGTGTAGGACAATCACTGAAGCATAGAGTCCAGGGTCATATACCACCTGGTTTAGGCATGTATGGAACACCAGTTGGTCATCCTGTGGCTGCTCCTCCAGGGCATATGGCCTCTGCAGTTGGAACTCCTGTCATGCTTCCTCCTGGACCCCACCCTCATCCCCATCCCCATCCCCACCCCCATGCTCATCCTCATCCACCTTATGTTCTTCCTCTTGCTTACCCAATGGCACCTCCACCAATGCATCAATAA 930 0.4548 MSSSGTLWSYEEEKAFENAIAMHWIEEASKEQWEKIASAVPSKSMEEVKQHYQVLVEDVSAIEAGHIPFPNYAYEETTSSNKDFHGSSKASSSDKRSNCNYGSGFSGLGHDSTTHSSGKGGLSRSSEQERRKGIPWTEEEHRLFLLGLDKFGKGDWRSISRNFVISRTPTQVASHAQKYFIRLNSMNRDRRRSSIHDITSVNNGDVASSQAPITGQHSSTVSSSTMGVGQSLKHRVQGHIPPGLGMYGTPVGHPVAAPPGHMASAVGTPVMLPPGPHPHPHPHPHPHAHPHPPYVLPLAYPMAPPPMHQ* 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g02686 309 Gene3D - 1 69 - -
Phac3g02686 309 SUPERFAMILY Homeodomain-like 130 185 IPR009057 -
Phac3g02686 309 ProSiteProfiles Myb-like domain profile. 128 180 IPR001005 -
Phac3g02686 309 MobiDBLite consensus disorder prediction 272 292 - -
Phac3g02686 309 Gene3D - 134 186 - -
Phac3g02686 309 PANTHER TRANSCRIPTION FACTOR KUA1 4 302 - -
Phac3g02686 309 CDD SANT 8 56 IPR001005 -
Phac3g02686 309 SMART sant 132 182 IPR001005 -
Phac3g02686 309 SMART sant 4 58 IPR001005 -
Phac3g02686 309 FunFam Transcription factor SRM1 1 69 - -
Phac3g02686 309 MobiDBLite consensus disorder prediction 102 123 - -
Phac3g02686 309 SUPERFAMILY Homeodomain-like 8 62 IPR009057 -
Phac3g02686 309 ProSiteProfiles SANT domain profile. 136 184 IPR017884 -
Phac3g02686 309 CDD SANT 135 180 IPR001005 -
Phac3g02686 309 MobiDBLite consensus disorder prediction 201 225 - -
Phac3g02686 309 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 128 184 IPR017930 -
Phac3g02686 309 Pfam Myb-like DNA-binding domain 8 55 IPR001005 -
Phac3g02686 309 Pfam Myb-like DNA-binding domain 135 180 IPR001005 -
Phac3g02686 309 MobiDBLite consensus disorder prediction 102 134 - -
Phac3g02686 309 FunFam transcription factor MYB1R1 134 185 - -
Phac3g02686 309 NCBIfam myb-like DNA-binding domain, SHAQKYF class 132 182 IPR006447 GO:0003677
Phac3g02686 309 ProSiteProfiles Myb-like domain profile. 8 56 IPR001005 -
Phac3g02686 309 ProSiteProfiles SANT domain profile. 1 52 IPR017884 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g02686 Phac-Chr3 29439619 29441629 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Phac3g02686 Myb_DNA-binding 1.7e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g02686 - - gmx:100812196 531.176
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac3g02686 3 29439619 29441629 Phac3g02686 3 29439619 29441629 ECH