Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g02663 ATGACGATAGACGACGATAGCTCTATATATGTTGGGGGTCTCCCTTACGACATCACGGAGGAAACCATTCGCACTGTCTTCAATTTGTATGGTGCCATTCTTGATGTGAAGATTATCAACGACCAACGCAGTAGGGGGAAGTGCTATTGTTTTGTTACTTTCACAAATCCTAGGTCAGCAATCGACGCCATCAACGACATGAATGGCAGAACCATTGACGGTCGTGTGGTTAAAGTTAATGGGGTGAGGTCTCGTGGGGGCAGGCCAAACTTTGGCAGAGAACGGTATTATTATCATAATGATGAGAGGAATGGAGATTGGGATCGTGGGAGAGACCGAGACCGAGATTATGATCATGATAATAGTGGTAGGGATGGATACAGGAATCGGAGCAATGATTGGAATCGAGACCGTGATAGGTCTCGAGACCGAGACCAGGACAGGGATAGAAGATTTGAGCATATGCACGATTATGATCAAGATAGAGATCATATGTTAGACAATGACTGGAGTAGAGAGGATGATAGAGCTGAAGATGAAGAAGAACATAGGGGGGATGATGGAGATGTGGATAGAGACCACAACTTGGATTTTAATGCAGACAGGAAAACGGATAGGACAAGTGACCCTGATAGAAGTTTTGACGAAGATAGAAAAGATCAGTCAAGGAGAAACAATGACTTGAATGTTACAAATCAAAATAGCATGGATCTTTCATCAGAATCAACTGGTGCACATGATGATCAGGTAGAAGCTCAATTAGAGAGCTCAACTAAGCAGCTTGATCAACTAAAAAAAGAGGTTTCTCAAATGGAAGAGGGGTTGGAAGAGAAAAAGGTCCAGGTTAAGGAATTGCAAAAGCAATCTAAGAAACTGGAGGATGCACTGATCAATGCAAAGAAAAACTCTTCATATCATCAGATGCAGTTGATAAAGCTACATAAATGTTTTCTGCAAGTGAAAGATTGCACAGAAAGACTTAAAACTAGTGAAAAGGAACTTCAGGCTCTAATTGATACAGTTCTGTTAGAGATTGATGGTGATGGCGTTGGATTAAAGGATGGACTACTAACAAATGGAAGTCTTGATGCTAGATAG 1098 0.4153 MTIDDDSSIYVGGLPYDITEETIRTVFNLYGAILDVKIINDQRSRGKCYCFVTFTNPRSAIDAINDMNGRTIDGRVVKVNGVRSRGGRPNFGRERYYYHNDERNGDWDRGRDRDRDYDHDNSGRDGYRNRSNDWNRDRDRSRDRDQDRDRRFEHMHDYDQDRDHMLDNDWSREDDRAEDEEEHRGDDGDVDRDHNLDFNADRKTDRTSDPDRSFDEDRKDQSRRNNDLNVTNQNSMDLSSESTGAHDDQVEAQLESSTKQLDQLKKEVSQMEEGLEEKKVQVKELQKQSKKLEDALINAKKNSSYHQMQLIKLHKCFLQVKDCTERLKTSEKELQALIDTVLLEIDGDGVGLKDGLLTNGSLDAR* 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g02663 365 FunFam RNA-binding (RRM/RBD/RNP motifs) family protein 2 194 - -
Phac3g02663 365 SUPERFAMILY RNA-binding domain, RBD 4 112 IPR035979 GO:0003676
Phac3g02663 365 Coils Coil 247 302 - -
Phac3g02663 365 CDD RRM_SF 9 80 - -
Phac3g02663 365 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 7 84 IPR000504 GO:0003723
Phac3g02663 365 SMART rrm1_1 8 80 IPR000504 GO:0003723
Phac3g02663 365 MobiDBLite consensus disorder prediction 172 249 - -
Phac3g02663 365 PANTHER GEO13361P1-RELATED 7 185 - -
Phac3g02663 365 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 9 78 IPR000504 GO:0003723
Phac3g02663 365 MobiDBLite consensus disorder prediction 187 225 - -
Phac3g02663 365 Coils Coil 320 340 - -
Phac3g02663 365 MobiDBLite consensus disorder prediction 226 249 - -
Phac3g02663 365 MobiDBLite consensus disorder prediction 108 156 - -
Phac3g02663 365 Gene3D - 2 97 IPR012677 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g02663 Phac-Chr3 29185896 29191048 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g02663 3 79 Eukaryotic Initiation Factors Gene Family AT2G36660 33.766 7.45e-09 55.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g02663 - - vun:114179118 563.533