Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g02653 ATGAAGGGGGAAGTACAGCTTCAGCCTCCACCGGTTATGCAAAACCCTAGTGATTCGGACCCTTTGCTCCTTAACCAGGAGGAGGACGATGAGTCGCCGGGAAGCTCTGGTGAGATCAAGGATGACGAAGAAGACGTTGAGGCAGGCTTACTCCCCTGTTGTCGAATTTGCCTCGAAAGCGATTCTGACCCAGAGGATGAATTGATATCTCCATGCATGTGCAAAGGTACTCAACAGTTTGTTCATCGCTCATGTCTTGATCATTGGCGCTCTGTAAAGGAAGGATTTGCCTTCTCGCACTGCACCACCTGCAAAGCCCAATTTCATCTTAGAGTTGAATTATTTGAGGACAACTCTTGGCGTAAAATAAAGTTCAGGCTTTTTGTGGCAAGGGATGTTTTCCTTGTTTTTTTGGCTGTACAGACTGTGATTGCAGCTATTGGTGGCTTTGCGTACATCATGGACAAAGATGGTTCCTTCAGGAACTCATTTGATGATGGCTGGGATAAGATACTGTCAAGGCATCCAATTCCGTTTTATTATTGTATTGGAGTGCTGGCCTTCTTTGTACTGATTGGGTTTTTCGGTCTCATACTGCATTGCTCCTCCCTCAATACCAATGACCCCAGAATGGCTGGTTGTCAGAACTGTTGTTATGGATGGGGCATTCTGGATTGCTTTCCCGCTTCCATGGAGGCATGCTTTGCCCTTGTGGTTGTTTTCGTTGTCATCTTTGCAATTCTTGGTATAGCGTATGGTTTTCTTGCTGCCACCATGGCCATTCAAAGAATTTGGCAGAGGCACTACCATATCCTCACCAAGAGGGAGCTTACAAAGGAATACATAGTAGAGGATCTTCGTGGCTGTTATTTCCCACCAAAGTTGGACCCAGAACATGAAGGCCGCTTGAGAATGCTCAAGCTTTTGTGA 930 0.4613 MKGEVQLQPPPVMQNPSDSDPLLLNQEEDDESPGSSGEIKDDEEDVEAGLLPCCRICLESDSDPEDELISPCMCKGTQQFVHRSCLDHWRSVKEGFAFSHCTTCKAQFHLRVELFEDNSWRKIKFRLFVARDVFLVFLAVQTVIAAIGGFAYIMDKDGSFRNSFDDGWDKILSRHPIPFYYCIGVLAFFVLIGFFGLILHCSSLNTNDPRMAGCQNCCYGWGILDCFPASMEACFALVVVFVVIFAILGIAYGFLAATMAIQRIWQRHYHILTKRELTKEYIVEDLRGCYFPPKLDPEHEGRLRMLKLL* 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g02653 309 ProSiteProfiles Zinc finger RING-CH-type profile. 46 111 IPR011016 GO:0008270
Phac3g02653 309 CDD RING_CH-C4HC3_MARCH 54 105 - -
Phac3g02653 309 Pfam RING-variant domain 54 104 IPR011016 GO:0008270
Phac3g02653 309 MobiDBLite consensus disorder prediction 1 43 - -
Phac3g02653 309 PANTHER RING/FYVE/PHD ZINC FINGER SUPERFAMILY PROTEIN 14 309 - -
Phac3g02653 309 MobiDBLite consensus disorder prediction 23 43 - -
Phac3g02653 309 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 38 118 IPR013083 -
Phac3g02653 309 SUPERFAMILY RING/U-box 52 109 - -
Phac3g02653 309 SMART ringv_2 53 105 IPR011016 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g02653 Phac-Chr3 29059766 29069451 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g02653 1 309 C3H Transcription Factor Family AT1G11020 78.193 1.82e-169 471
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g02653 - - gmx:100818950 612.068