Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g02651 ATGTTGGTCTGCGGCCAAGAAGAGATTGAACTGTCACGGGATGGCAGCCACTACAGTCTCTCCACGGGAATACTTCCGTCTCTCGGAGCCAAAAGCAACCGCAGAATCAAGCTCCGCCGCTTCATTCTATCGCCCTACGACCGCCGTTACAGGATATGGGAAACTTTCCTTGTTGTTCTGGTAGTTTATACTGCTTGGGTTTCTCCCTTCGAATTCGGATTCTTGAAGAAGCCACAAGCACCCCTTTCCATTTCTGATAATATTGTCAATGGATTTTTTTTCATGGATATAGTTCTCACCTTCTTCGTGGCTTACATTGACAAAACCACCTATTTGTTCGTGGACGACCGGAAAGATATTGCTTGGAAATATGCAAGGACTTGGTTGGCGTTCGATGTTATCTCCATCATTCCTTCAGAGCTTGTACAAAAGATATCACCTTCTCCTCTTCAATCCTACGGTTTATTTAACATGCTTCGCCTTTGGCGTCTTCGAAGAGTCAGTGCTTTGTTTTCTCGGCTTGAGAAGGACAGAAACTATAACTATTTTTGGGTTCGGTGTGCTAAGCTTATTTCTGTTACCCTCTTCGCTGTTCATTGTGCTGCATGTTTCTATTATCTTATTGCTGCACGTTATCATGATCCAACAAAGACATGGATTGGTGTAGCGATGGGTAATTTCCTTGAACACAGCTTGTGGTCAAGATATGTGACATCTATATACTGGTCTATTACTACCTTAACAACTGTTGGCTATGGAGATTTGCATCCAGTGAATTCAAGGGAGATGACCTTTGACATCTTTTATATGCTCTTTAATCTGGGGTTAACAGCATATTTGATTGGTAATATGACCAACTTGGTTGTCCATGGCACAAGTCGAACCAGAAAATTTAGAGATACCATCCAAGCTGCCTCAAATTTTGCCCATAGGAATCAATTACCTCCTAGGTTGCAAGACCAAATGCTTGCCCACTTGTGTTTGAAGTATAGAACAGACTCAGAAGGTTTGCAGCAGCAAGAGACACTTGATTCTCTTCCCAAAGCCATCAGATCCAGCATTTCACATCATCTTTTCTATTCTCTTATTGATAAGGTCTACTTGTTTCACGGGGTTTCGGATGACTTGCTCTTTCAATTGGTGTCAGAGATGAAAGCTGAATATTTTCCACCCAAAGAAGATGTTATCTTGCAAAACGAAGCCCCCACTGACTTTTATATACTGGTCACTGGTGCCGTGGACCTGGTAGTTCTTCGAAATGGGGTTGAACAGGTTGTTGGAGAGGCCAAAACTGGTGATCTTTTCGGTGAGATTGGTGTGCTCTGTTACAAGCCACAGCTTTTCACAGTTCGAACGAAGCGACTAAGCCAGTTGCTGAGGCTAAACCGTACTACTTTCTTGAATATTCTTCAGGCCAACGTGGGAGACGGAACCATAATCATGACTAATCTGCTTCAGCATTTAAAGGAGCTCAACGATCCAATCATGGAGGGAGTTTTGGCGGAGATTGAGACCATGTTAGCTCGTGGTAGAATGGACCTACCAGTTAGTGTGTGCTTTGCGGCAGCAAGAGGAGATGACTTGTTGTTACATCAGTTGCTGAAACGAGGCATGGATCCAAACGAATCCGACAACAATCGAAGGACAGCTTTGCATATAGCAGCATCTCACGGGAAAGAGAACTGTGTTCTGCTTCTGTTAGATTATGGAGCGGATCCCAACATTAAAGATTTGGATGGCAATGTAGCACTGTGGGAGGCTATAGTGGGAGGACATGAGTCAGTTAGCAAGGTGTTGGCAGAAAATGGAGCTAACTTGCAATGCGGGGATGTGGGCCAGTTTGCATGTACGGCTGTTGAGCAGAACAAATTGAATTTGCTGAAGGAAATAAGGCGCTACGGAGGAGATATCACACTTCCAAGCATCAACGGTGGGACCACAGCGTTGCACGTTGCAGTCTCGGACGGCAACGTTGAAATTGTCAAATACCTTTTGGATCACGGGGCAAGCATTGACAAACCTGACAAGCATGGCTGGACCGCCACAGATCTGGCAGATCAGCAATCACATACAGAAATAAAAGCCATTTTTGACTCCACTGTGGAGCCTAAGGTTCAGTCTTCCGTTACCATTCCCGAGAAGCCGAGTAAGATCAGGTACCTTGGAAGGTTTACTAGTGAGCCAACCATGCCTTTACCCCTTGATGGCTCATTTCATGGAACAGATGCCTCTTGGAGCCAGAGCCAGAGACAGAGACAGAGCCAGCCCCAAGACCGTCCAAGGCGTAGGAGCAACAATTATCATAACTCACTCTTAGGGATAATGGTAGCAGCACACAATGGGGAAAAGGACCTGCTTTTGTCTCTTAACATGAATAACAAGGCAAGCAATAGCATGCAGAGTAGTAGTGCAGTTGGTTCAACTAGGGTAGTTATTAGTTGCCCTGAGAGGGGTGAGGTTGCGGGGAAGCTTGTTTTACTACCTGGAACCTTTCAAGAGCTACTTGAGATTGGAGCCAAAAAATTTGGTTTCTATCCTGCCAAGATTGTATGCAAAGATGGAGGTCAAATCGAAGATTTAGAGGTTATTAGAGATGGTGACCATCTTGTATTTCTCGGTGCTGATGGGTTATAG 2634 0.4472 MLVCGQEEIELSRDGSHYSLSTGILPSLGAKSNRRIKLRRFILSPYDRRYRIWETFLVVLVVYTAWVSPFEFGFLKKPQAPLSISDNIVNGFFFMDIVLTFFVAYIDKTTYLFVDDRKDIAWKYARTWLAFDVISIIPSELVQKISPSPLQSYGLFNMLRLWRLRRVSALFSRLEKDRNYNYFWVRCAKLISVTLFAVHCAACFYYLIAARYHDPTKTWIGVAMGNFLEHSLWSRYVTSIYWSITTLTTVGYGDLHPVNSREMTFDIFYMLFNLGLTAYLIGNMTNLVVHGTSRTRKFRDTIQAASNFAHRNQLPPRLQDQMLAHLCLKYRTDSEGLQQQETLDSLPKAIRSSISHHLFYSLIDKVYLFHGVSDDLLFQLVSEMKAEYFPPKEDVILQNEAPTDFYILVTGAVDLVVLRNGVEQVVGEAKTGDLFGEIGVLCYKPQLFTVRTKRLSQLLRLNRTTFLNILQANVGDGTIIMTNLLQHLKELNDPIMEGVLAEIETMLARGRMDLPVSVCFAAARGDDLLLHQLLKRGMDPNESDNNRRTALHIAASHGKENCVLLLLDYGADPNIKDLDGNVALWEAIVGGHESVSKVLAENGANLQCGDVGQFACTAVEQNKLNLLKEIRRYGGDITLPSINGGTTALHVAVSDGNVEIVKYLLDHGASIDKPDKHGWTATDLADQQSHTEIKAIFDSTVEPKVQSSVTIPEKPSKIRYLGRFTSEPTMPLPLDGSFHGTDASWSQSQRQRQSQPQDRPRRRSNNYHNSLLGIMVAAHNGEKDLLLSLNMNNKASNSMQSSSAVGSTRVVISCPERGEVAGKLVLLPGTFQELLEIGAKKFGFYPAKIVCKDGGQIEDLEVIRDGDHLVFLGADGL* 878
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g02651 877 Pfam KHA, dimerisation domain of potassium ion channel 809 871 IPR021789 -
Phac3g02651 877 SMART cnmp_10 368 485 IPR000595 -
Phac3g02651 877 SUPERFAMILY Ankyrin repeat 518 697 IPR036770 -
Phac3g02651 877 Gene3D - 51 289 - -
Phac3g02651 877 Pfam Cyclic nucleotide-binding domain 388 473 IPR000595 -
Phac3g02651 877 ProSiteProfiles Ankyrin repeat profile. 644 676 IPR002110 GO:0005515
Phac3g02651 877 ProSiteProfiles Ankyrin repeat profile. 546 578 IPR002110 GO:0005515
Phac3g02651 877 CDD CAP_ED 368 473 IPR000595 -
Phac3g02651 877 Gene3D Jelly Rolls 332 492 IPR014710 -
Phac3g02651 877 Pfam Ankyrin repeats (3 copies) 520 607 IPR002110 GO:0005515
Phac3g02651 877 PRINTS EAG/ELK/ERG potassium channel family signature 262 273 IPR003938 GO:0005249|GO:0006813|GO:0016020
Phac3g02651 877 PRINTS EAG/ELK/ERG potassium channel family signature 236 253 IPR003938 GO:0005249|GO:0006813|GO:0016020
Phac3g02651 877 PRINTS EAG/ELK/ERG potassium channel family signature 63 70 IPR003938 GO:0005249|GO:0006813|GO:0016020
Phac3g02651 877 PRINTS EAG/ELK/ERG potassium channel family signature 97 106 IPR003938 GO:0005249|GO:0006813|GO:0016020
Phac3g02651 877 PRINTS EAG/ELK/ERG potassium channel family signature 86 96 IPR003938 GO:0005249|GO:0006813|GO:0016020
Phac3g02651 877 PRINTS EAG/ELK/ERG potassium channel family signature 280 289 IPR003938 GO:0005249|GO:0006813|GO:0016020
Phac3g02651 877 MobiDBLite consensus disorder prediction 740 754 - -
Phac3g02651 877 SUPERFAMILY cAMP-binding domain-like 293 488 IPR018490 -
Phac3g02651 877 FunFam Potassium channel KAT2 356 492 - -
Phac3g02651 877 SUPERFAMILY Voltage-gated potassium channels 45 289 - -
Phac3g02651 877 FunFam Potassium channel SKOR 51 289 - -
Phac3g02651 877 Pfam Ankyrin repeats (many copies) 644 685 IPR002110 GO:0005515
Phac3g02651 877 ProSiteProfiles Ankyrin repeat profile. 579 611 IPR002110 GO:0005515
Phac3g02651 877 SMART ANK_2a 579 608 IPR002110 GO:0005515
Phac3g02651 877 SMART ANK_2a 546 575 IPR002110 GO:0005515
Phac3g02651 877 SMART ANK_2a 644 673 IPR002110 GO:0005515
Phac3g02651 877 SMART ANK_2a 513 542 IPR002110 GO:0005515
Phac3g02651 877 MobiDBLite consensus disorder prediction 731 765 - -
Phac3g02651 877 Pfam Ion transport protein 51 295 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Phac3g02651 877 ProSiteProfiles KHA domain profile. 809 877 IPR021789 -
Phac3g02651 877 ProSiteProfiles cAMP/cGMP binding motif profile. 368 470 IPR000595 -
Phac3g02651 877 Gene3D - 514 698 IPR036770 -
Phac3g02651 877 ProSiteProfiles Ankyrin repeat region circular profile. 644 676 - -
Phac3g02651 877 PANTHER POTASSIUM CHANNEL AKT1 16 871 IPR045319 GO:0005249|GO:0006813
Phac3g02651 877 ProSiteProfiles Ankyrin repeat region circular profile. 546 577 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g02651 Phac-Chr3 29052943 29059647 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g02651 11 871 Ion Channels AT2G25600 62.299 0.0 1093
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g02651 K21867 - gmx:100781642 1566.21