Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g02614 ATGGACGAAGATTCCCTCAAACGCAATACCGATTGTGTTTATTTCTTGGCGTCTCCCCTCACTTGCAAGAAGGGGGCTGAATGTGAGTATCGGCACAATGAGATTGCCAGGCTTAACCCTAGGGATTGCTGGTACTGGGTATCTGGCGAATGCCTTAATCCAACGTGTGCTTTTAGACACCCTCCTCTGGATGGGCACACTGGAGTGCCAGCACCTTCTGAACCTACACAAAATTCATTGCCTGCAAACAAGACAATGGTACCGTGCTATTTTTTCTTCAATGGATTTTGCAACAAAGGTGACAAATGCTCTTTTTTGCATGGGTCTGATGATAGCATTTTTACTGGAAAACCTGTGAAGAATGATAACGGAAGCACCGACGCACACAATCTAGAAAATAAATCATCATCAGGAAATGGAACTGGTGTAGCGTCAGTACCAACTCACCAATCTTTAACTGCTCCAAAGCATTTGTCTGACTTTAAGCTTCAGCCCAAGGAAGATCATCAGTTACAGTTAACCAAAAATGTCAAGCAGCAAGGCGATTCCTTAGTGATATCTGCTTTATCAGTGAGTAGGTCAGACTCTCCGTTTCCACATGATGGCTTTGTTCATAATATGTCTCATTTACGCACTGAGCAGGGTTCGGAGGAGCAAGTAAATAGTCAAATTGAGCCTGAGGAGCGGTGGGAATCATCCCCTCATTCCCCTGGATTTGACGTTCTTGTTCACGATGAATTGGAGAACATCGGTTACGAGGAAGATTCTGAATATTTACCAGTGCTCGATAGGAATGAGCAAGAGCTGAATGAACAGTACCTGGGGCATGAATTTAAGGATCCAATTGAGTATGATATTATGTGCCCTGAAGCTGATATTCTGTATCCACAAGAAACATATGATGGTTACAGATGTTTTGATAGAGACCTTGCTCATGCTAATGGCAGAACAGTTCGTACTTATTCCAGAGATATATTCTTAGATTCTATATTCTCCAGAAAAAGGATTCGGATGTCAGCTGAGGTGGCTGCTTATGACAGTAATTTAGATCTACGTGACCATCTGAGGAGACGTAGAGAAAATAATGGGCCTCCCAGAAGACAAGAATCGTCTTCTTTGATGATTCGAAACCAGGAAAGGCATCAGAGGCCTGGCATTGAGCAGCGGCCAAGTAGAAGATTGACATCGCAACTGGGATATAGTGCTATAGATTCGATTGGAGAAGTTGAAACTCTTTCAATCGCTAACAAGCACGGGTTATTCAGGCGTTCCCAGCAACATAGACCACGGAAGCATTATAGAGAAAAACCAGTCAAACGATCATTTCTGTCATCTAAAATATCCAGGAAACCAGTTTCTAAACAAAGGGGATTTATTCAAGAATCCACTACATTTTCAGGACCTAAGTCCCTTGCAGAAATTAAAGAAGAGAAGAAGAAGGCTGAGGAAGGTTTACATTGGAAAAGCACATCAACTGATTTCCAGGATCCCAAACCTCTGAGTGAAATTCTCAAGGACAAAAGGACCATGGATTAG 1536 0.4264 MDEDSLKRNTDCVYFLASPLTCKKGAECEYRHNEIARLNPRDCWYWVSGECLNPTCAFRHPPLDGHTGVPAPSEPTQNSLPANKTMVPCYFFFNGFCNKGDKCSFLHGSDDSIFTGKPVKNDNGSTDAHNLENKSSSGNGTGVASVPTHQSLTAPKHLSDFKLQPKEDHQLQLTKNVKQQGDSLVISALSVSRSDSPFPHDGFVHNMSHLRTEQGSEEQVNSQIEPEERWESSPHSPGFDVLVHDELENIGYEEDSEYLPVLDRNEQELNEQYLGHEFKDPIEYDIMCPEADILYPQETYDGYRCFDRDLAHANGRTVRTYSRDIFLDSIFSRKRIRMSAEVAAYDSNLDLRDHLRRRRENNGPPRRQESSSLMIRNQERHQRPGIEQRPSRRLTSQLGYSAIDSIGEVETLSIANKHGLFRRSQQHRPRKHYREKPVKRSFLSSKISRKPVSKQRGFIQESTTFSGPKSLAEIKEEKKKAEEGLHWKSTSTDFQDPKPLSEILKDKRTMD* 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g02614 511 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 86 108 IPR000571 GO:0046872
Phac3g02614 511 PANTHER ZN-FINGER, C-X8-C-X5-C-X3-H TYPE-CONTAINING 1 510 - -
Phac3g02614 511 SUPERFAMILY CCCH zinc finger 83 108 IPR036855 GO:0046872
Phac3g02614 511 MobiDBLite consensus disorder prediction 373 388 - -
Phac3g02614 511 MobiDBLite consensus disorder prediction 471 489 - -
Phac3g02614 511 MobiDBLite consensus disorder prediction 420 439 - -
Phac3g02614 511 MobiDBLite consensus disorder prediction 118 147 - -
Phac3g02614 511 SMART c3hfinal6 7 34 IPR000571 GO:0046872
Phac3g02614 511 SMART c3hfinal6 83 109 IPR000571 GO:0046872
Phac3g02614 511 SMART c3hfinal6 39 62 IPR000571 GO:0046872
Phac3g02614 511 MobiDBLite consensus disorder prediction 453 469 - -
Phac3g02614 511 ProSiteProfiles Zinc finger C3H1-type profile. 37 63 IPR000571 GO:0046872
Phac3g02614 511 MobiDBLite consensus disorder prediction 421 437 - -
Phac3g02614 511 MobiDBLite consensus disorder prediction 453 511 - -
Phac3g02614 511 MobiDBLite consensus disorder prediction 355 392 - -
Phac3g02614 511 ProSiteProfiles Zinc finger C3H1-type profile. 83 110 IPR000571 GO:0046872
Phac3g02614 511 ProSiteProfiles Zinc finger C3H1-type profile. 6 35 IPR000571 GO:0046872
Phac3g02614 511 FunFam Zinc finger CCCH domain-containing protein 17 1 63 - -
Phac3g02614 511 Pfam Zinc-finger containing family 7 63 IPR041686 -
Phac3g02614 511 Gene3D - 2 63 - -
Phac3g02614 511 Gene3D - 74 142 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g02614 Phac-Chr3 28760170 28763065 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Phac3g02614 zf-CCCH_3 2.3e-11 CL0537
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g02614 - - gmx:100792282 812.372