Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g02613 ATGGTACCGTGCTATTTTTTCTTCAATGGATTTTGCAACAAAGGTGACAAATGCTCTTTTTTGCATGGGTCTGATGATAGCATTTTTACTGGAAAACCTGTGAAGAATGATAACGGAAGCACCGACGCACACAATCTAGAAAATAAATCATCATCAGGAAATGGAACTGGTGTAGCGTCAGTACCAACTCACCAATCTTTAACTGCTCCAAAGCATTTGTCTGACTTTAAGCTTCAGCCCAAGGAAGATCATCAGTTACAGTTAACCAAAAATGTCAAGCAGCAAGGCGATTCCTTAGTGATATCTGCTTTATCAGTGAGTAGGTCAGACTCTCCGTTTCCACATGATGGCTTTGTTCATAATATGTCTCATTTACGCACTGAGCAGGGTTCGGAGGAGCAAGTAAATAGTCAAATTGAGCCTGAGGAGCGGTGGGAATCATCCCCTCATTCCCCTGGATTTGACGTTCTTGTTCACGATGAATTGGAGAACATCGGTTACGAGGAAGATTCTGAATATTTACCAGTGCTCGATAGGAATGAGCAAGAGCTGAATGAACAGTACCTGGGGCATGAATTTAAGGATCCAATTGAGTATGATATTATGTGCCCTGAAGCTGATATTCTGTATCCACAAGAAACATATGATGGTTACAGATGTTTTGATAGAGACCTTGCTCATGCTAATGGCAGAACAGTTCGTACTTATTCCAGAGATATATTCTTAGATTCTATATTCTCCAGAAAAAGGATTCGGATGTCAGCTGAGGTGGCTGCTTATGACAGTAATTTAGATCTACGTGACCATCTGAGGAGACGTAGAGAAAATAATGGGCCTCCCAGAAGACAAGAATCGTCTTCTTTGATGATTCGAAACCAGGAAAGGCATCAGAGGCCTGGCATTGAGCAGCGGCCAAGTAGAAGATTGACATCGCAACTGGGATATAGTGCTATAGATTCGATTGGAGAAGTTGAAACTCTTTCAATCGCTAACAAGCACGGGTTATTCAGGCGTTCCCAGCAACATAGACCACGGAAGCATTATAGAGAAAAACCAGTCAAACGATCATTTCTGTCATCTAAAATATCCAGGAAACCAGTTTCTAAACAAAGGGGATTTATTCAAGAATCCACTACATTTTCAGGACCTAAGTCCCTTGCAGAAATTAAAGAAGAGAAGAAGAAGGCTGAGGAAGGTTTACATTGGAAAAGCACATCAACTGATTTCCAGGATCCCAAACCTCTGAGTGAAATTCTCAAGGACAAAAGGACCATGGATTAG 1281 0.4137 MVPCYFFFNGFCNKGDKCSFLHGSDDSIFTGKPVKNDNGSTDAHNLENKSSSGNGTGVASVPTHQSLTAPKHLSDFKLQPKEDHQLQLTKNVKQQGDSLVISALSVSRSDSPFPHDGFVHNMSHLRTEQGSEEQVNSQIEPEERWESSPHSPGFDVLVHDELENIGYEEDSEYLPVLDRNEQELNEQYLGHEFKDPIEYDIMCPEADILYPQETYDGYRCFDRDLAHANGRTVRTYSRDIFLDSIFSRKRIRMSAEVAAYDSNLDLRDHLRRRRENNGPPRRQESSSLMIRNQERHQRPGIEQRPSRRLTSQLGYSAIDSIGEVETLSIANKHGLFRRSQQHRPRKHYREKPVKRSFLSSKISRKPVSKQRGFIQESTTFSGPKSLAEIKEEKKKAEEGLHWKSTSTDFQDPKPLSEILKDKRTMD* 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g02613 426 MobiDBLite consensus disorder prediction 335 354 - -
Phac3g02613 426 MobiDBLite consensus disorder prediction 288 303 - -
Phac3g02613 426 MobiDBLite consensus disorder prediction 386 404 - -
Phac3g02613 426 ProSiteProfiles Zinc finger C3H1-type profile. 1 25 IPR000571 GO:0046872
Phac3g02613 426 SUPERFAMILY CCCH zinc finger 3 23 IPR036855 GO:0046872
Phac3g02613 426 MobiDBLite consensus disorder prediction 368 384 - -
Phac3g02613 426 MobiDBLite consensus disorder prediction 336 352 - -
Phac3g02613 426 MobiDBLite consensus disorder prediction 368 426 - -
Phac3g02613 426 MobiDBLite consensus disorder prediction 270 307 - -
Phac3g02613 426 PANTHER ZN-FINGER, C-X8-C-X5-C-X3-H TYPE-CONTAINING 1 425 - -
Phac3g02613 426 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 2 23 IPR000571 GO:0046872
Phac3g02613 426 MobiDBLite consensus disorder prediction 33 62 - -
Phac3g02613 426 Gene3D - 1 58 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g02613 Phac-Chr3 28760170 28763065 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Phac3g02613 zf-CCCH 0.00025 CL0537
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g02613 - - aprc:113847503 644.039
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac3g02613 3 28760170 28763065 Phac3g02613 3 28760170 28763065 ECH