Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g02587 ATGGAGAATATTGCGTTGGTGGATGGTCCTTATTTAAAGGATGAAATGTCACAAGAAGAGTGCTCCGCTTCTTGCTTGGCTGATTGCAATTGTGAGGCTGCATTTTACGACGGTACAAACTGCATGAAACAGAGGCTGCCTTTGAGATATCTCAGAAGGACATTAGAAATTTTCGGTAGCCCAGTGCTATTGTGGAAAGTGGGAGGCAGCCTCAGCAATCGGACAGGGAAAGATAATCCTGTGCCTGAACAACCACCAATCAGAGCAACAAGTAATAAAGCAACGGTGCATATTATTGTCATCACATCCATTTTTTCTCTGCTTTTATGTTCAACCATTGTCATCTCCAGCCACTACATGTACAAGATTCGACTTTTGAAATATAAAAGATTGATGGAAACTGGGAACTTGGGCCTGAATGAAGAGGTGACTTTGAGAAGGTTTTCATACAGCGAACTCAAAAGAGCCACAAATAATTTCAAGATAGAACTGGGAAAAGGGTCTTTCGGAGCAGTTTACAAGGGGGCGTTGGAGAAAGGTAAGAGGTTGATTGCTGTGAAGAGACTGGAGAAGTTAGTGGAAGAAGGAGAAAGCGAGTTCCAAGCAGAAATGAGAGCCATTGGAAAAACCCGTCACAGGAATCTAGTTCGTTTGTTGGGTTTCTGTGTGGAGGGTTCTAAAAGGCTTCTGGTGTATGAGTACATGTCCAATGGTTCCCTTGGAAACCTTATCTTTGTGGGTAAGAGTCAGAGACGTCCAGAGTGGGATGAGAGAGTAAGAATAGCGGTGGAGATTGCGAGAGGGATAATGTATCTCCATGAAGAGTGTGAGGCACCAATCATTCATTGTGACATAAAGCCTCAGAACATCTTGGTGGATGAGTTCTGGACTGCCAAAATATCCGATTTTGGGCTGGCCAAACTTCTCATGCCCGATCAAACCAGAACCATGACAAGGGCTAGAGGGACAAGAGGGTACGTGGCCCCTGAATGGAACATGAATGTCCCCATATCTGTCAAGACTGATGTTTATAGCTACGGAATAATGCTGTTGGAAATTCTATGTTGCAGAAGAAACTTCGAAGTTCATGTCTCTGAACCTGAGGCGGTTATGCTCTCCACCTGGGCTTATAACTGTTTTGTTGCAGGAAAACTCAATAAGCTTTTTCCTTGGGAAGTTGTGGATGACAAAACTGCCGTGGAAAATATGCTTAAAGTGGCACTTTGGTGTATCCAAGATGAACCTTTTCTTCGCCCAACAATCAAGAGTGTCGTATTGATGTTAGAAGGGGTCACGGACATAGCAATTCCTCCTTGTCCCACTTCCAATTCTGCTTGA 1338 0.4387 MENIALVDGPYLKDEMSQEECSASCLADCNCEAAFYDGTNCMKQRLPLRYLRRTLEIFGSPVLLWKVGGSLSNRTGKDNPVPEQPPIRATSNKATVHIIVITSIFSLLLCSTIVISSHYMYKIRLLKYKRLMETGNLGLNEEVTLRRFSYSELKRATNNFKIELGKGSFGAVYKGALEKGKRLIAVKRLEKLVEEGESEFQAEMRAIGKTRHRNLVRLLGFCVEGSKRLLVYEYMSNGSLGNLIFVGKSQRRPEWDERVRIAVEIARGIMYLHEECEAPIIHCDIKPQNILVDEFWTAKISDFGLAKLLMPDQTRTMTRARGTRGYVAPEWNMNVPISVKTDVYSYGIMLLEILCCRRNFEVHVSEPEAVMLSTWAYNCFVAGKLNKLFPWEVVDDKTAVENMLKVALWCIQDEPFLRPTIKSVVLMLEGVTDIAIPPCPTSNSA* 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g02587 445 Coils Coil 186 206 - -
Phac3g02587 445 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 15 440 - -
Phac3g02587 445 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 235 436 - -
Phac3g02587 445 ProSiteProfiles Protein kinase domain profile. 158 436 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac3g02587 445 SUPERFAMILY Protein kinase-like (PK-like) 142 429 IPR011009 -
Phac3g02587 445 FunFam S-receptor-like serine/threonine-protein kinase 128 234 - -
Phac3g02587 445 ProSitePatterns Serine/Threonine protein kinases active-site signature. 280 292 IPR008271 GO:0004672|GO:0006468
Phac3g02587 445 Pfam Protein kinase domain 163 425 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac3g02587 445 SMART serkin_6 158 428 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac3g02587 445 ProSitePatterns Protein kinases ATP-binding region signature. 164 187 IPR017441 GO:0005524
Phac3g02587 445 CDD STKc_IRAK 164 430 - -
Phac3g02587 445 Gene3D Transferase(Phosphotransferase) domain 1 235 436 - -
Phac3g02587 445 Gene3D Phosphorylase Kinase; domain 1 125 234 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g02587 Phac-Chr3 28598772 28600109 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g02587 81 434 Receptor kinase-like Gene Family AT1G56120 39.503 8.21e-68 230
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Phac3g02587 Pkinase 1.7e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g02587 - - gmx:100815958 699.893