Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g02584 ATGGTACAAACAAAGAAGTTCAGAGGTGTCAGGCAGCGCCATTGGGGTTCATGGGTATCCGAAATTCGCCACCCACTTCTTAAGAGAAGGGTGTGGCTGGGGACATTTGAAACAGCAGAAGAAGCTGCTAGAGCCTATGATCAAGCTGCTATTCTGATGAGTGGTAGAAATGCCAAAACAAATTTCCCAATAACTCAAACCCCTGAAGGTGATCCAAAGAGCATTATCAGTGAGGACAGCCCCTCCTCCACCTCCAAGGATCTGGAGGAAATCCTGCATGCTAAGCTTCGAAAATGTGGTAAGGTGCCTTCACCTTCTATGACCTGTTTGAGGCTTGACACAGAGAACTCCCACATCGGAGTGTGGCAAAAGCGCGCTGGGAGACGTTCGGATTCAAATTGGGTCATGACAGTTCAGCTGGAAAAGAAGAGTGCCAACAAGGAGACTCATCAAGCTGATATAAACACTTCTCTTTCTCTACCTTCTTCTGATCATCACCACCACCATGAGTCTCCATCCGGTGTGACAGGTCATCACCATCATCAAGAAGTGGTGAGAGGAGAGATTGATGAAGAAGAGAGAATAGCCCTTCAGATGATAGAGGAACTCCTCAACGACAGAAACTGCCCTAGTCCTTCATTCAACAACATTCAAGAAAGGGATGGTGCCGATGATGACACCTTTTTACTTTAA 693 0.4661 MVQTKKFRGVRQRHWGSWVSEIRHPLLKRRVWLGTFETAEEAARAYDQAAILMSGRNAKTNFPITQTPEGDPKSIISEDSPSSTSKDLEEILHAKLRKCGKVPSPSMTCLRLDTENSHIGVWQKRAGRRSDSNWVMTVQLEKKSANKETHQADINTSLSLPSSDHHHHHESPSGVTGHHHHQEVVRGEIDEEERIALQMIEELLNDRNCPSPSFNNIQERDGADDDTFLL* 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g02584 230 CDD AP2 5 65 IPR001471 GO:0003700|GO:0006355
Phac3g02584 230 MobiDBLite consensus disorder prediction 61 82 - -
Phac3g02584 230 SUPERFAMILY DNA-binding domain 6 64 IPR016177 GO:0003677
Phac3g02584 230 Gene3D AP2/ERF domain 5 65 IPR036955 GO:0003700|GO:0006355
Phac3g02584 230 PRINTS Ethylene responsive element binding protein signature 7 18 IPR001471 GO:0003700|GO:0006355
Phac3g02584 230 PRINTS Ethylene responsive element binding protein signature 29 45 IPR001471 GO:0003700|GO:0006355
Phac3g02584 230 MobiDBLite consensus disorder prediction 61 84 - -
Phac3g02584 230 SMART rav1_2 6 69 IPR001471 GO:0003700|GO:0006355
Phac3g02584 230 MobiDBLite consensus disorder prediction 206 230 - -
Phac3g02584 230 Pfam AP2 domain 6 54 IPR001471 GO:0003700|GO:0006355
Phac3g02584 230 FunFam Ethylene-responsive transcription factor 2 5 64 - -
Phac3g02584 230 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 4 161 - -
Phac3g02584 230 ProSiteProfiles AP2/ERF domain profile. 6 63 IPR001471 GO:0003700|GO:0006355
Phac3g02584 230 MobiDBLite consensus disorder prediction 162 185 - -
Phac3g02584 230 MobiDBLite consensus disorder prediction 156 185 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g02584 Phac-Chr3 28577732 28579058 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g02584 1 205 AP2-EREBP Transcription Factor Family AT1G15360 61.137 3.07e-76 227
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Phac3g02584 AP2 9.6e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g02584 - - gmx:100814893 384.8