Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g02563 ATGACAAGCTGCGGCATCGATGTTGCGCCTGAGCAACTCTGTTACATCCCCTGCAACTTTTGCAATATTGTTCTTGCGGTGAGTGTTCCATGCAGCAGCCTGTTTGACATTGTGACCGTTCGATGCGGGCACTGCACCAATCTATGGTCCGTGAACATGGCCGCCGCGTTTCAGTCACTGTCATGGCAAGATGTTCAGGGACCTGGGCACTGCAACCCAGAGTACAGGATTGACACTGGCTCCACCTCCAAATGCAACAACAGGATTGCAATGCGTGCACCCACCACTAATGTATCTGAGGAAAGGGTTGTGAATAGGCCTCCCGAGAAGAGGCAGCGCGTACCTTCTGCTTATAATCAGTTTATAAAGGAAGAGATTCAGAGGATCAAAGCCAATAATCCTGATATCAGTCACAGAGAAGCGTTCAGTACAGCTGCAAAAAACTGGGCACATTTTCCCCATATTCACTTTGGGCTGATGCTGGACAGCAACAACCAAGCTAAGATGGAAAATGTTTCTGAGAAGCATTTAATGTCAAGGGCTGCGCTAATGAATAAATGA 561 0.4795 MTSCGIDVAPEQLCYIPCNFCNIVLAVSVPCSSLFDIVTVRCGHCTNLWSVNMAAAFQSLSWQDVQGPGHCNPEYRIDTGSTSKCNNRIAMRAPTTNVSEERVVNRPPEKRQRVPSAYNQFIKEEIQRIKANNPDISHREAFSTAAKNWAHFPHIHFGLMLDSNNQAKMENVSEKHLMSRAALMNK* 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g02563 186 CDD HMG-box_SF 113 149 - -
Phac3g02563 186 Gene3D High mobility group box domain 97 178 IPR036910 -
Phac3g02563 186 FunFam Axial regulator YABBY 104 176 - -
Phac3g02563 186 Pfam YABBY protein 9 159 IPR006780 GO:0007275
Phac3g02563 186 PANTHER PROTEIN YABBY 6-RELATED 9 169 IPR006780 GO:0007275
Phac3g02563 186 SUPERFAMILY HMG-box 103 152 IPR036910 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g02563 Phac-Chr3 28377836 28381830 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g02563 8 169 C2C2-YABBY Transcription Factor Family AT2G26580 76.543 3.34e-91 261
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-YABBY Phac3g02563 YABBY 2.4e-69 CL0114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g02563 K25796 - gmx:100804731 377.096