Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g02543 ATGGAGCTTCAACTCGGTCTCGCTCTCTCAACCAATTCATCTCAACTACTTGACCTCAATTCTCATGCCTACGACTCTATCTTCCCTTTCCATCACAACAAACGTACCTTCTCCCAACTCATTCCCACGCTCTCTCTCCTCCCTCTGACGCCAAACCATCATCAAGAAGATCATCATCATCATGATAACCACACCCAATGCTCTACCATCACCAAGAAGGATGATGAAGAAGATGTAGAAGGTGTTGTGGGTTGGCCACCAGTAAACTACTGGAGGAAGAAAATTCGTGTCGATAACTGCGGAGACCACGAGGAGGTTGTGGGGAATAACGATGACATAGTATGGGTTGACCAGTGTCACGGCCGTGGTTGTTCAGCCACTGGAAGGTCCAATTCTCTGTACGTGAAGGTGAAGATGGAGGGTGTTGGAATCGCACGGAAGGTCGATCTTGGCATGCACCAGTCCTTTGAGACGCTCATGGAAACCTTGATGGACATGTTTGGAACAGGTCTTCAAGAATGCTATGAATTGGCTTATCAGGACAAGGAGGGTGACTGGCTTCTCGCACAAGATGTACCTTGGAGGAGTTTCGTTGGGTGTGCAAGAAGACTGAAATTGGTGAAGAGTAGCAGCAGATGA 639 0.4804 MELQLGLALSTNSSQLLDLNSHAYDSIFPFHHNKRTFSQLIPTLSLLPLTPNHHQEDHHHHDNHTQCSTITKKDDEEDVEGVVGWPPVNYWRKKIRVDNCGDHEEVVGNNDDIVWVDQCHGRGCSATGRSNSLYVKVKMEGVGIARKVDLGMHQSFETLMETLMDMFGTGLQECYELAYQDKEGDWLLAQDVPWRSFVGCARRLKLVKSSSR* 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g02543 212 Pfam AUX/IAA family 175 210 IPR033389 -
Phac3g02543 212 Pfam AUX/IAA family 25 168 IPR033389 -
Phac3g02543 212 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 2 211 IPR003311 GO:0005634|GO:0006355
Phac3g02543 212 SUPERFAMILY CAD & PB1 domains 123 206 - -
Phac3g02543 212 MobiDBLite consensus disorder prediction 52 78 - -
Phac3g02543 212 Gene3D - 127 212 - -
Phac3g02543 212 MobiDBLite consensus disorder prediction 51 78 - -
Phac3g02543 212 ProSiteProfiles PB1 domain profile. 132 212 IPR000270 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g02543 Phac-Chr3 28157927 28159489 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g02543 127 209 B3 DNA Binding Superfamily AT3G61830 33.333 7.23e-09 53.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Phac3g02543 AUX_IAA 2.1e-20 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g02543 K14484 - gmx:100808466 224.942