Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g02538 ATGAAAGTTGTGAGCATGGAGACAGAGAAGAAGTGTGGTTGCTGGTCTGTCCTTAAACGCGGTGTTAGAGGTGCGTGCAAACCTACAGCTTCCAGAGACTCTGCTAACACTATCCCTCGTACTAGTCTCGTTTATGATGCAGCAACCGAGACAAGATACCTGAATGCTAGCAATCGAGAACTTTGTCCTCCCCTTGAAGCTCGATTATCTTCTGATAACCCTGATCCCCCACCCCAGGAGACCAAGGCTGCATGCCAGCTTCTTCAATTTTCATTTCAAGAGCTTAAAGCTGCAACTGGAAATTTCAGACCTGATAGCATTCTTGGGGAAGGTGGCTTTGGTTATGTTTTCAAAGGATGGATTGAGGAAGATGGAACCTCGCCAGCTAAACCTGGGTCAGGGATTACAGTGGCTGTCAAAAGCTTGAAGCCAGATGGCCTTCAGGGCCATAGAGAATGGGTGGCTGAAGTTGACTTTCTTGGACAGCTTCACCATCCTAACCTTGTGAAACTTATCGGTTACTGCATTGAAGATGATCAGCGGCTTCTTGTTTATGAGTTTATGACCCGTGGAAGTCTAGAAAATCATCTATTCAGAAGAACCGTACCCCTCCCGTGGTCCAACAGAGTTAAGATAGCCCTTGGTGCAGCAAAAGGATTGGCCTTCCTCCATAATGGTCCAGAACCAGTCATTTATAGAGATTTTAAGACATCTAACATTTTGCTTGATACGGAGTATAATGCAAAGCTTTCAGATTTTGGTCTAGCAAAAGCAGGACCTCAAGGAGACAAAACACATGTTTCTACCAGAGTAGTTGGAACTTATGGTTATGCTGCTCCAGAATATGTCATGACAGGTCAGGATGACACTCTTTAG 876 0.4509 MKVVSMETEKKCGCWSVLKRGVRGACKPTASRDSANTIPRTSLVYDAATETRYLNASNRELCPPLEARLSSDNPDPPPQETKAACQLLQFSFQELKAATGNFRPDSILGEGGFGYVFKGWIEEDGTSPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTVPLPWSNRVKIALGAAKGLAFLHNGPEPVIYRDFKTSNILLDTEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYGYAAPEYVMTGQDDTL* 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g02538 291 ProSiteProfiles Protein kinase domain profile. 102 291 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac3g02538 291 FunFam Serine/threonine-protein kinase BIK1 70 187 - -
Phac3g02538 291 Gene3D Transferase(Phosphotransferase) domain 1 188 290 - -
Phac3g02538 291 Pfam Protein tyrosine and serine/threonine kinase 106 286 IPR001245 GO:0004672|GO:0006468
Phac3g02538 291 SUPERFAMILY Protein kinase-like (PK-like) 90 287 IPR011009 -
Phac3g02538 291 Gene3D Phosphorylase Kinase; domain 1 78 187 - -
Phac3g02538 291 ProSitePatterns Serine/Threonine protein kinases active-site signature. 230 242 IPR008271 GO:0004672|GO:0006468
Phac3g02538 291 ProSitePatterns Protein kinases ATP-binding region signature. 108 140 IPR017441 GO:0005524
Phac3g02538 291 PANTHER OS01G0588500 PROTEIN-RELATED 71 287 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g02538 Phac-Chr3 28099926 28104589 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g02538 90 287 Glycoside Hydrolase AT3G07070 59.901 1.13e-78 243
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Phac3g02538 PK_Tyr_Ser-Thr 6.5e-34 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g02538 - - aprc:113848012 570.081