Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g02471 ATGGGAAAGAAAATGAAGCAAATAGGAGAAATAAGGGAGGATAGTAAAATGGGAGATAGCAGCCCCAAAGCATATGATAATGATACTATGGTGTTTATATCCATGTCTCAAGAATTGAAGAATGAGGGGAACAAGCTGTTCCAAAAGAGGGATCTAGAAGGAGCTATACTCAAATATGAGAAAGCCCTCAAGTTACTTCCAGGAAATCATATTGATGTGTCCTATCTGCGGAGCAACATGGCTGCATGTTATATGCAGAAGGGGGTCAGTGAGTTCCCAAAGGCTATTCATGAGTGTGATTTGGCTCTTGAAGTGACACCCAAATATGGTAAAGCACTGTTGAAGAGAGCAAGGTGCTATGAGGCTTTAAATAGGCTGGATTTAGCTCTAAGAGATGTCAGTACTGTTCTGAAGATGGAACCAAATAATGTCATGGCATTAGAGATCTCAGAAAAAGTGAAAACTGCACTTGAGGAGAAAGGATTGAGAGTTAATGATACAATAATTGAGTTGCCTCCAGATTATGTCGAACCTCCTAGTGCTTTGACTCCAGAAAAGGTAGTGAAAGAGAAAATGCGCAAGAAGAAGGGCTATAAAGAGGAAAAGAAGGCTCCTGATGACAAAATTCTAGAAAGGCAAACCGAGGAGAAATCTGAGGAGAAGGCTGAGGGCAGTATTGTGGTCGTTGAGAAGAAGATCAATGGATCCAAGAAGAAGAAGGCCAAGGAAAAAATTGATGAGAAGAAGGCTGACATAAAGGAAGTTATAGAGGAAAGAAGTAATGGTAGGAGGGAACACGTTTCGAACAAAACAGTTAAACTTATTTTTGGTGATGATATAAGATGTGCTGAACTGCCTATCAATTATAGCCTCTTCCAGTTAAGAGAAGTTATTCAAGACCGATTTTCGAGCCTAGGAGCTGTTTTAGTCAAATACAGGGACCAAGAAGGTGATTTAGTCACAATCACTTCTGATGATGAATTAAGATGGGCTGAAACAGGATCTCATAGTTCTATACGACTGTACATAGTAGAAGCCACTCCTGAGCAGGATCCACTTTTTGAGAAATTTAAAGTGAAGGAGGCGGAAGTGGTTGGCATTAACATAGCACATGAGAATGGTTGTGTGGGAAAAGCTAATGGAATTGTTAGCTCTTCTTGCATTGAGGATTGGATAATTCAGTTTGCCAAATTGTTCAAGAACCATGTTGGTTTTGAATCTGACATATATTTGGATTTTCACGAACATGGTATGAAGCACTATTCCGAGGCTCTGGAGGAGACTGTTACAAGCGAAGAAGCACAAGGCCTATTTGACATGGCAGGAGATAAGTTCCAAGAGATGACTGCTCTTGCATTGTTCAACTGGGGAAATGTGCATATGTCTAAGGCAAGGAAAAAGGTATATAAAACAGAAGACTGTTCTAAAGAGAATCTATGCGTACTGATAAACAGTTCATATGAATGGGCACTGGAAGAGTATTTAAAGGCAGGAGAAAAATATGATTCGGCCATTAAAATGAAGTCAGATTTTCACGAAGGCTTCCTGGCGCTGGGGCTGCAGCAGTTTGAGCAAGCAAAACTTTCGTGGTATCATGCACTCAGTAGTAATGCAGACTTATTAACATGGCCTTCCGCTGAGGTTCTTCATCTTTACAACAATGCTGAAGAAAATATTGAGAGAGGAATGCAGATATGGGAAGAATCTGAAAAGCAGAACTTGAGTAAAACGTCTAATTCAAACTATGCTATATTGGATTTGCAGAACATGGGGTTGGATGGGCTTTTTAAAACTATGTCCTTTGATGAACTTGCAGCACAGGAGGCACATATGAGGTCTCAAATAAATCTCCTATGGGGTACCATTCTATATGAACGCTCAATTGTGGAGTTCAAAGTAGGGCTACCTATGTGGCATGAAACACTTGCGGTTTCAGTTGAGAAATTTGAACTTGCAGGAGCTTCTCCAACAGATATAGCTGTAATTTTGAAGAACCACTGTTCAAATAAGACTGCAGTAGATGGTCTTGCCTTCAAAATTGATGAAATAGTACAGGCATGGAATGAGATGTACAAAGCTAAAATGTGGAAAAGTGGAGTTCCATCATTTCGTTTGGAACCCTTATTTAGAAGGCGAGTTTCAAAAACTGATCATGCCTTTGAGCTTGCATGA 2172 0.4006 MGKKMKQIGEIREDSKMGDSSPKAYDNDTMVFISMSQELKNEGNKLFQKRDLEGAILKYEKALKLLPGNHIDVSYLRSNMAACYMQKGVSEFPKAIHECDLALEVTPKYGKALLKRARCYEALNRLDLALRDVSTVLKMEPNNVMALEISEKVKTALEEKGLRVNDTIIELPPDYVEPPSALTPEKVVKEKMRKKKGYKEEKKAPDDKILERQTEEKSEEKAEGSIVVVEKKINGSKKKKAKEKIDEKKADIKEVIEERSNGRREHVSNKTVKLIFGDDIRCAELPINYSLFQLREVIQDRFSSLGAVLVKYRDQEGDLVTITSDDELRWAETGSHSSIRLYIVEATPEQDPLFEKFKVKEAEVVGINIAHENGCVGKANGIVSSSCIEDWIIQFAKLFKNHVGFESDIYLDFHEHGMKHYSEALEETVTSEEAQGLFDMAGDKFQEMTALALFNWGNVHMSKARKKVYKTEDCSKENLCVLINSSYEWALEEYLKAGEKYDSAIKMKSDFHEGFLALGLQQFEQAKLSWYHALSSNADLLTWPSAEVLHLYNNAEENIERGMQIWEESEKQNLSKTSNSNYAILDLQNMGLDGLFKTMSFDELAAQEAHMRSQINLLWGTILYERSIVEFKVGLPMWHETLAVSVEKFELAGASPTDIAVILKNHCSNKTAVDGLAFKIDEIVQAWNEMYKAKMWKSGVPSFRLEPLFRRRVSKTDHAFELA* 724
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g02471 723 Pfam PB1 domain 271 344 IPR000270 GO:0005515
Phac3g02471 723 SMART tpr_5 110 143 IPR019734 GO:0005515
Phac3g02471 723 SMART tpr_5 36 69 IPR019734 GO:0005515
Phac3g02471 723 SMART tpr_5 74 109 IPR019734 GO:0005515
Phac3g02471 723 ProSiteProfiles TPR repeat profile. 36 69 IPR019734 GO:0005515
Phac3g02471 723 SMART PB1_new 269 346 IPR000270 GO:0005515
Phac3g02471 723 Coils Coil 238 265 - -
Phac3g02471 723 ProSiteProfiles TPR repeat profile. 110 143 IPR019734 GO:0005515
Phac3g02471 723 CDD PB1 271 343 - -
Phac3g02471 723 Gene3D Tetratricopeptide repeat domain 32 168 IPR011990 GO:0005515
Phac3g02471 723 MobiDBLite consensus disorder prediction 1 21 - -
Phac3g02471 723 PANTHER PROTEIN CLMP1 12 721 IPR044517 -
Phac3g02471 723 MobiDBLite consensus disorder prediction 189 216 - -
Phac3g02471 723 Gene3D - 268 349 - -
Phac3g02471 723 SUPERFAMILY CAD & PB1 domains 266 355 - -
Phac3g02471 723 SUPERFAMILY TPR-like 36 149 IPR011990 GO:0005515
Phac3g02471 723 ProSiteProfiles PB1 domain profile. 269 346 IPR000270 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g02471 Phac-Chr3 27517391 27521581 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g02471 19 143 Calmodulin-binding Proteins AT3G25230 30.216 5.17e-07 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g02471 K26538 - gmx:100778972 1198.34