Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g02450 ATGGCTGAACAAACCGAGAAGGCTTTTCTGAAGCAACCAAAAGTGTTCCTCAGCTCGAAGAAAACTGGCAAGGGGAAGAGACCTGGTAAAGGTGGAAACCGTTTTTGGAAATCCATTGGTCTTGGATTTAAGACTCCCAGGGATGCCATCGAAGGAACATACATTGACAAGAAGTGCCCCTTCACTGGCAATGTCTCTATTCGTGGCCGTATCCTCGCAGGAACATGTCACAGTGCTAAGATGAATAGGACTATTGTTGTTAGGAGGAATTATCTCCATTTTATTAAGAAGTACCAGAGGTATGAGAAGAGGCACTCCAATATTCCTGCTCATATATCACCTTGTTTCCGTGTGAAGGAAGGTGATCATGTCATTATTGGTCAATGCAGGCCACTCTCCAAGACAGTGAGGTTCAATGTCTTGAAAGTGATTCCTGCAGGATCTTCTAGCGGTGCAAAGAAAGCATTTACTGGAATGACATTTAGACGTTGCGGCGGGCTGGATTTGTAG 510 0.4471 MAEQTEKAFLKQPKVFLSSKKTGKGKRPGKGGNRFWKSIGLGFKTPRDAIEGTYIDKKCPFTGNVSIRGRILAGTCHSAKMNRTIVVRRNYLHFIKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSSGAKKAFTGMTFRRCGGLDL* 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g02450 169 Gene3D - 1 158 - -
Phac3g02450 169 FunFam 40S ribosomal protein S11 1 158 - -
Phac3g02450 169 Pfam Ribosomal protein S17 74 142 IPR000266 GO:0003735|GO:0005840|GO:0006412
Phac3g02450 169 PANTHER 40S RIBOSOMAL PROTEIN S11 FAMILY MEMBER 10 151 IPR000266 GO:0003735|GO:0005840|GO:0006412
Phac3g02450 169 PRINTS Ribosomal protein S17 family signature 88 111 IPR000266 GO:0003735|GO:0005840|GO:0006412
Phac3g02450 169 PRINTS Ribosomal protein S17 family signature 131 138 IPR000266 GO:0003735|GO:0005840|GO:0006412
Phac3g02450 169 PRINTS Ribosomal protein S17 family signature 121 131 IPR000266 GO:0003735|GO:0005840|GO:0006412
Phac3g02450 169 NCBIfam 30S ribosomal protein S17 55 143 IPR028333 -
Phac3g02450 169 ProSitePatterns Ribosomal protein S17 signature. 121 133 IPR019979 GO:0003735|GO:0005840|GO:0006412
Phac3g02450 169 SUPERFAMILY Nucleic acid-binding proteins 68 147 IPR012340 -
Phac3g02450 169 Pfam Ribosomal_S17 N-terminal 4 72 IPR032440 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g02450 Phac-Chr3 27333634 27336040 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g02450 1 159 Cytoplasmic Ribosomal Protein Gene Family AT5G23740 89.308 1.02e-97 277
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g02450 K02949 - gmx:100784140 308.916