Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g02446 ATGGGTTCCTCTTCTAGTAGACATGCTTCTCGCCCTTCTGCTTCTTCTACTCACAGGGTCAACCGCTTCAGATTGTCGTCTCTTCTATGTGGCACCTCCACCTCTCGCTCCATTCACCAGATGGAAGAACATTCATCTGAACTTCAGGTTCATTTAGCAAGAAATTTTGAAGGTGAAATTCATAAAGTCACTGAGGAAACATCTTTATCATGTACAGAAGCTAGAATTAGCTGCAGTCCCCCTGCTGAAACTTCAACCTCATCTGATATGAGAACCGAGTTCCATGGGAATACTAGTGCTGGAAGTTCTTATAGAAACGTTGCAACACATGGTCAGAGGAACTGCTTGTCTGAACATGAGGAGCAAGCCCCTCCTTGTCAGGTAAGTGCTGGTCATAGTGGTCGTGAATCATATAGTGATAGTAGCAACACAGCTAGTACTTCATTTGTAGCACAGCAGTCTTCAGATCCAGTCTCTGTAAATGTTTCTGCTAACAAGGATGTAGTTAATGACGTTAATTATCCAGTGGTTAGTGGTGGTGTCTCTCAAGTTTCTCATGAGACAGTGCATCCAAGAAGTTCAACCCCCCATGACCATGTAAATTTCAGTTCTGGGGAAATTTCTGTTGAGAATCACAATAGTGCATTCATTTCTATCCAGAATTCTTCCAACCCTGTTGCTCAAGGTTCCAACTTAGCAGCAACTTCTCAAGGGCAAGAAGAAGAACCTTGTCGTGAGACAATACCTTCAGGTTTAGGTATTCTTGTATCCAATCGGGAAAGAGGACCAGGAAATGATAGTGTGCTTCAAGTTGACGTGGTCACAATATCTTCCAACATTTTGTCTGGAAGCAATGCTGATGCTAATGATCATGATGCTAGAAGGAGTGGTAGAAGATTATTTTGGGATGCTTTTTCACGACGTAGTTCTAGAAGGCTTGGTGATTCTCCAACCATTGTCTTCTCTACTGGAGTTGCTGATGATCCTGGATCTCAAGATCGATGGCTTGTTGATTTTGGTGGTGATTTGTCAAATGATGGGGTTGGAGGTGCTTCTGCATATATGGGCAGTAGAATTCACAGATTGAATGAACGAAGAAGGCGGCACTCAAGATCTGAGATCTGGGATAGGCTTCGTGGTGGCTTTGATGAGATTGGCCGATGGAATTCATGTCCACTAGGACTCCATGCAGATGGCATGTGCTCATGCGAGTCTTCCCCAATGGCTGATGAATCAAGCACTCGAGCAAGTATTTCAAGAATAGTCATGTTGGCTGAGGCGTTGTTTGAGGTTTTAGATGAAATCCATCGGCAACCTGGATCACTGTCTCTATCCATGGTCTCACTCCCTGCCCCTGAATCAATTGTTGATTCCTTTCCCCTGAAATCTCACAAAAAGGTTGAAGTGGCTGATGGAGGCAATGATGTTGAACAATGTTACATATGTCTGGCGGAGTACGAAGAAGGGGACCAAATACGAGTTCTTCCTTGCCTCCATGAGTATCACATGTCATGTGTGGACAAGTGGCTTAAAGAAATACACGGTGTATGTCCTCTGTGTCGTGGCAATGTGTGTGGAGGGTTCACAGAGTCTTCTGCCAACTCAGAAGTGCAATCTCATTGA 1623 0.4418 MGSSSSRHASRPSASSTHRVNRFRLSSLLCGTSTSRSIHQMEEHSSELQVHLARNFEGEIHKVTEETSLSCTEARISCSPPAETSTSSDMRTEFHGNTSAGSSYRNVATHGQRNCLSEHEEQAPPCQVSAGHSGRESYSDSSNTASTSFVAQQSSDPVSVNVSANKDVVNDVNYPVVSGGVSQVSHETVHPRSSTPHDHVNFSSGEISVENHNSAFISIQNSSNPVAQGSNLAATSQGQEEEPCRETIPSGLGILVSNRERGPGNDSVLQVDVVTISSNILSGSNADANDHDARRSGRRLFWDAFSRRSSRRLGDSPTIVFSTGVADDPGSQDRWLVDFGGDLSNDGVGGASAYMGSRIHRLNERRRRHSRSEIWDRLRGGFDEIGRWNSCPLGLHADGMCSCESSPMADESSTRASISRIVMLAEALFEVLDEIHRQPGSLSLSMVSLPAPESIVDSFPLKSHKKVEVADGGNDVEQCYICLAEYEEGDQIRVLPCLHEYHMSCVDKWLKEIHGVCPLCRGNVCGGFTESSANSEVQSH* 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g02446 540 MobiDBLite consensus disorder prediction 225 243 - -
Phac3g02446 540 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 445 525 IPR013083 -
Phac3g02446 540 MobiDBLite consensus disorder prediction 74 113 - -
Phac3g02446 540 SUPERFAMILY RING/U-box 470 524 - -
Phac3g02446 540 MobiDBLite consensus disorder prediction 132 159 - -
Phac3g02446 540 MobiDBLite consensus disorder prediction 74 159 - -
Phac3g02446 540 SMART ring_2 479 520 IPR001841 -
Phac3g02446 540 ProSiteProfiles Zinc finger RING-type profile. 479 521 IPR001841 -
Phac3g02446 540 PANTHER RING ZINC FINGER DOMAIN SUPERFAMILY PROTEIN-RELATED 1 539 - -
Phac3g02446 540 Pfam Ring finger domain 478 521 IPR001841 -
Phac3g02446 540 MobiDBLite consensus disorder prediction 225 245 - -
Phac3g02446 540 FunFam Putative RING zinc finger domain superfamily protein 446 526 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g02446 Phac-Chr3 27308932 27312944 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g02446 390 525 C3H Transcription Factor Family AT5G45290 53.642 3.62e-41 154
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g02446 - - gmx:100783722 896.73