Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g02427 ATGGCTTCCGAGAAACTCACCGATTACGAGCTCAAGCGACTCGAGAACATTCGCCGGAACGATGAGATGATGGCAGCGCTCAAACTCCATTCTAAAGCCACCCAACTCTCCAATTTCAAGCGTCAAAGAGTTGAAACCAAATCCTACCGCGTGAAATCGGAAAAGAAACCTAAAATTGAAACCCCGGTTGTTATCCGAGTCAGACGCTCCCTCCGAACCAGGGGTATTCCACCAGACTGCCAAGGTCTTGACGGAGATTCCGTATGCCCTATCACTCCTTCAGAAGAAAAACCACCTTGTGACGTAAGTTTGGGTCCTCTTTCCATGGCCAATGTCCGTGAAAGCGCTCACTCTGATAGTTCCTTCATTGAATCGCTAATTGGTATGGCCCAAGATGACAGTGTTCAAAAAGGAAAAATGGTGAATTCCCTTGATTTGGAATCTCTGTCTTTGGATCCCGAGAATATTGCGCGGGTTACTTCTGGAAGGATTACCAATGTCACTTTTTTCCCTTCCAGTAGTGTCAGAATGCTTGCCGCGGGGAACAAGTTTGGGAATATTGCGTTTTGGAATGTGGGAGATAATGAGGTGCATTTATACCATCCCCATCAGGCTCCCATTTCTGGGATCTTGATTCAACCACATTGTTTTTCCAAGATATACACAAGTTGTTATGATGGAGTTCTTCGGCTGATGGATGCTGAGAAGGAAATCTTTGATCTGGTGTTTGAGAGTGATGAAAAAATATATGCTCTTTCTCAACCTACAAATGAGACTAACTGCCTATATCTTGCCGAGGGTTCTGGAGGTTTGACTATTTGGGATAACAGGGTGGGAAAACGATCGTCGAACTGGGATTTGCATGACAGCAGGATTAACACGATAGATTTCAACTGTGAAAACCCTCATATTGTAGCTACTAGTTCCTCTGATGCAACTGCCTGCACATGGGATTTGAGATATATTAATAATAATAACCTCACAGCCTTAAGGACATTTACCCACAAAAGATCTGTCCAATCTGCTTACTTCTCTCCTTCTGGAGGTAGCCTTGCAACTACAAGCTTGGACAACACCGTCGGTATTTACAGTGGAGTTAACTACGAGGATGCGGCTGTTATTTCTCATTTCAATCAGACTGGCAGATGGCTTTCTACATTCAGAGCGAAATGGGGTTGGGATGACAAATATCTCTTCATTGGAAATATGAGTAGAGGGGTTGATGTGGTCTCAGCCGTTCAAAGGAAAATAGCTATGACTTTAGAGAGCCCACACATGTCTGCCATTCCTTGCAGATTCGCTATAAACTCTTACGAGGTTGGGATGCTTGTAGGAGCTACAAGTGGAGGCCAGGTTTATGTCTGGACATCACGCTAG 1377 0.4452 MASEKLTDYELKRLENIRRNDEMMAALKLHSKATQLSNFKRQRVETKSYRVKSEKKPKIETPVVIRVRRSLRTRGIPPDCQGLDGDSVCPITPSEEKPPCDVSLGPLSMANVRESAHSDSSFIESLIGMAQDDSVQKGKMVNSLDLESLSLDPENIARVTSGRITNVTFFPSSSVRMLAAGNKFGNIAFWNVGDNEVHLYHPHQAPISGILIQPHCFSKIYTSCYDGVLRLMDAEKEIFDLVFESDEKIYALSQPTNETNCLYLAEGSGGLTIWDNRVGKRSSNWDLHDSRINTIDFNCENPHIVATSSSDATACTWDLRYINNNNLTALRTFTHKRSVQSAYFSPSGGSLATTSLDNTVGIYSGVNYEDAAVISHFNQTGRWLSTFRAKWGWDDKYLFIGNMSRGVDVVSAVQRKIAMTLESPHMSAIPCRFAINSYEVGMLVGATSGGQVYVWTSR* 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g02427 458 ProSitePatterns Trp-Asp (WD) repeats signature. 305 319 IPR019775 -
Phac3g02427 458 SUPERFAMILY WD40 repeat-like 152 455 IPR036322 GO:0005515
Phac3g02427 458 PANTHER UNCHARACTERIZED 4 457 - -
Phac3g02427 458 FunFam WD repeat-containing protein 76 155 457 - -
Phac3g02427 458 Gene3D - 155 458 IPR015943 GO:0005515
Phac3g02427 458 SMART WD40_4 193 233 IPR001680 GO:0005515
Phac3g02427 458 SMART WD40_4 326 364 IPR001680 GO:0005515
Phac3g02427 458 SMART WD40_4 278 318 IPR001680 GO:0005515
Phac3g02427 458 SMART WD40_4 150 191 IPR001680 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g02427 Phac-Chr3 27153443 27156335 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g02427 161 409 U-box Gene Family AT1G04510 22.814 1.52e-06 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g02427 K24755 - gmx:100800122 740.725