Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g02395 ATGCAACCTTGTAGTAGAGAAATGCAAGGCCCTAACAATAACTCTCTCTTTAATGGCAACAACAATAGCAGTAACAATGAACAACAGATTCAGTTTGACGCAGCTTCCAACGACGATTTCCTCAAACACATGCTTTCCAACCTTCCTTCTTCTCCATGGACACTAGAACCCAAACCCAACCCCAACCCCTTGTGGGACCCTAATTCCGACGAAACAACGCCGGATAATAACGTCCTTTACCCCTACGACCTCCAACAAGCCAACTTGGCCTCCAAGTTTCGCAACCACCACATCACCGATGACAAAGCCTCCGCTCTAATGCTCCAACACCACCAACTCCTCCTCTCCTCCGCCGCCGCCGCTGCCGCTGCCAATTCCCCCCTCCTCCAAATGCCCGTCTCCTCGCTAAACGACGTCGTTCATGCCCCCTCCTTCAAATCTCCCACTCCAAACGCTGACCCTTCTTCTGTTCAACCTCTCTACAACGCCTTCTCCGCCTCTCTCCAGGGCGGCGCCGCCCAACCCTCCAACCAAACTCACCATTTTCAACTTCCTCAACAGGGGCAGAGTTTTGGAGCTTCGGCTCCGGCGAGTGGCGCTTCCGGTCAGCCGAAGCAGAGGGTTAGGGCGAGGAGAGGTCAAGCCACGGACCCACACAGCATCGCCGAAAGGTTACGGAGGGAGAGAATCGCAGAGCGAATGAAGGCCCTACAGGAACTGGTTCCCAACGCCAACAAGACTGATAAGGCCTCCATGTTGGATGAGATCATCGATTATGTGAAGTTCCTACAGCTCCAAGTCAAGGTTTTAAGCATGAGCAGACTGGGAGGTGCAGCCGCTGTAGCACCCCTTGTTGCTGATATATCTTCGGAGGGAGGCGGTGACTGCGTTCAACCAAAAAGCAACAACGCCAACGGTAACTCAAACGACACCCTAGCCACGACGGAGCAACAGGTGGCGAAGCTGATGGAGGAAGACATGGGGTCCGCCATGCAGTACCTGCAGGGGAAAGGTCTCTGCCTTATGCCGATTTCTCTGGCCACAGCCATCTCCAAAGCCACGTGTCACGCCAGGAACCCTTTCATCAACGGTGATGGGCCCTCCTCTCCCGGAATGTCCGCGCTCACCCTGCACTCTTCCACTCTCAGCAATGGCCTCGTGAAAGACACCGCCTCCGTTTCCAAGTCCTGA 1191 0.5466 MQPCSREMQGPNNNSLFNGNNNSSNNEQQIQFDAASNDDFLKHMLSNLPSSPWTLEPKPNPNPLWDPNSDETTPDNNVLYPYDLQQANLASKFRNHHITDDKASALMLQHHQLLLSSAAAAAAANSPLLQMPVSSLNDVVHAPSFKSPTPNADPSSVQPLYNAFSASLQGGAAQPSNQTHHFQLPQQGQSFGASAPASGASGQPKQRVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVKVLSMSRLGGAAAVAPLVADISSEGGGDCVQPKSNNANGNSNDTLATTEQQVAKLMEEDMGSAMQYLQGKGLCLMPISLATAISKATCHARNPFINGDGPSSPGMSALTLHSSTLSNGLVKDTASVSKS* 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g02395 396 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 214 263 IPR011598 GO:0046983
Phac3g02395 396 MobiDBLite consensus disorder prediction 1 26 - -
Phac3g02395 396 Gene3D - 209 271 IPR036638 GO:0046983
Phac3g02395 396 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 55 350 - -
Phac3g02395 396 MobiDBLite consensus disorder prediction 50 76 - -
Phac3g02395 396 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 212 274 IPR036638 GO:0046983
Phac3g02395 396 FunFam Transcription factor bHLH66 211 276 - -
Phac3g02395 396 Pfam Helix-loop-helix DNA-binding domain 219 264 IPR011598 GO:0046983
Phac3g02395 396 MobiDBLite consensus disorder prediction 188 222 - -
Phac3g02395 396 SMART finulus 220 269 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g02395 Phac-Chr3 26820645 26824240 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g02395 203 385 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G24260 69.841 7.56e-89 267
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Phac3g02395 HLH 1.5e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g02395 - - gmx:100801457 464.151