Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g02393 ATGCAACCTTGTAGTAGAGAAATGCAAGGCCCTAACAATAACTCTCTCTTTAATGGCAACAACAATAGCAGTAACAATGAACAACAGATTCAGTTTGACGCAGCTTCCAACGACGATTTCCTCAAACACATGCTTTCCAACCTTCCTTCTTCTCCATGGACACTAGAACCCAAACCCAACCCCAACCCCTTGTGGGACCCTAATTCCGACGAAACAACGCCGGATAATAACGTCCTTTACCCCTACGACCTCCAACAAGCCAACTTGGCCTCCAAGTTTCGCAACCACCACATCACCGATGACAAAGCCTCCGCTCTAATGCTCCAACACCACCAACTCCTCCTCTCCTCCGCCGCCGCCGCTGCCGCTGCCAATTCCCCCCTCCTCCAAATGCCCGTCTCCTCGCTAAACGACGTCGTTCATGCCCCCTCCTTCAAATCTCCCACTCCAAACGCTGACCCTTCTTCTGTTCAACCTCTCTACAACGCCTTCTCCGCCTCTCTCCAGGGCGGCGCCGCCCAACCCTCCAACCAAACTCACCATTTTCAACTTCCTCAACAGAGTTTTGGAGCTTCGGCTCCGGCGAGTGGCGCTTCCGGTCAGCCGAAGCAGAGGGTTAGGGCGAGGAGAGGTCAAGCCACGGACCCACACAGCATCGCCGAAAGGTTACGGAGGGAGAGAATCGCAGAGCGAATGAAGGCCCTACAGGAACTGGTTCCCAACGCCAACAAGACTGATAAGGCCTCCATGTTGGATGAGATCATCGATTATGTGAAGTTCCTACAGCTCCAAGTCAAGGTTTTAAGCATGAGCAGACTGGGAGGTGCAGCCGCTGTAGCACCCCTTGTTGCTGATATATCTTCGGAGGGAGGCGGTGACTGCGTTCAACCAAAAAGCAACAACGCCAACGGTAACTCAAACGACACCCTAGCCACGACGGAGCAACAGGTGGCGAAGCTGATGGAGGAAGACATGGGGTCCGCCATGCAGTACCTGCAGGGGAAAGGTCTCTGCCTTATGCCGATTTCTCTGGCCACAGCCATCTCCAAAGCCACGTGTCACGCCAGGAACCCTTTCATCAACGGTGATGGGCCCTCCTCTCCCGGAATGTCCGCGCTCACCCTGCACTCTTCCACTCTCAGCAATGGCCTCGTGAAAGACACCGCCTCCGTTTCCAAGTCCTGA 1185 0.5451 MQPCSREMQGPNNNSLFNGNNNSSNNEQQIQFDAASNDDFLKHMLSNLPSSPWTLEPKPNPNPLWDPNSDETTPDNNVLYPYDLQQANLASKFRNHHITDDKASALMLQHHQLLLSSAAAAAAANSPLLQMPVSSLNDVVHAPSFKSPTPNADPSSVQPLYNAFSASLQGGAAQPSNQTHHFQLPQQSFGASAPASGASGQPKQRVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVKVLSMSRLGGAAAVAPLVADISSEGGGDCVQPKSNNANGNSNDTLATTEQQVAKLMEEDMGSAMQYLQGKGLCLMPISLATAISKATCHARNPFINGDGPSSPGMSALTLHSSTLSNGLVKDTASVSKS* 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g02393 394 MobiDBLite consensus disorder prediction 1 26 - -
Phac3g02393 394 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 55 348 - -
Phac3g02393 394 SMART finulus 218 267 IPR011598 GO:0046983
Phac3g02393 394 MobiDBLite consensus disorder prediction 188 220 - -
Phac3g02393 394 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 212 261 IPR011598 GO:0046983
Phac3g02393 394 Pfam Helix-loop-helix DNA-binding domain 217 262 IPR011598 GO:0046983
Phac3g02393 394 MobiDBLite consensus disorder prediction 50 76 - -
Phac3g02393 394 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 210 272 IPR036638 GO:0046983
Phac3g02393 394 Gene3D - 207 269 IPR036638 GO:0046983
Phac3g02393 394 FunFam Transcription factor bHLH66 209 274 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g02393 Phac-Chr3 26820645 26824240 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g02393 201 383 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G24260 69.841 6.02e-89 267
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Phac3g02393 HLH 1.5e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g02393 - - gmx:100801457 465.307