Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g02392 ATGCTTTCCAACCTTCCTTCTTCTCCATGGACACTAGAACCCAAACCCAACCCCAACCCCTTGTGGGACCCTAATTCCGACGAAACAACGCCGGATAATAACGTCCTTTACCCCTACGACCTCCAACAAGCCAACTTGGCCTCCAAGTTTCGCAACCACCACATCACCGATGACAAAGCCTCCGCTCTAATGCTCCAACACCACCAACTCCTCCTCTCCTCCGCCGCCGCCGCTGCCGCTGCCAATTCCCCCCTCCTCCAAATGCCCGTCTCCTCGCTAAACGACGTCGTTCATGCCCCCTCCTTCAAATCTCCCACTCCAAACGCTGACCCTTCTTCTGTTCAACCTCTCTACAACGCCTTCTCCGCCTCTCTCCAGGGCGGCGCCGCCCAACCCTCCAACCAAACTCACCATTTTCAACTTCCTCAACAGGGGCAGAGTTTTGGAGCTTCGGCTCCGGCGAGTGGCGCTTCCGGTCAGCCGAAGCAGAGGGTTAGGGCGAGGAGAGGTCAAGCCACGGACCCACACAGCATCGCCGAAAGGTTACGGAGGGAGAGAATCGCAGAGCGAATGAAGGCCCTACAGGAACTGGTTCCCAACGCCAACAAGACTGATAAGGCCTCCATGTTGGATGAGATCATCGATTATGTGAAGTTCCTACAGCTCCAAGTCAAGGTTTTAAGCATGAGCAGACTGGGAGGTGCAGCCGCTGTAGCACCCCTTGTTGCTGATATATCTTCGGAGGGAGGCGGTGACTGCGTTCAACCAAAAAGCAACAACGCCAACGGTAACTCAAACGACACCCTAGCCACGACGGAGCAACAGGTGGCGAAGCTGATGGAGGAAGACATGGGGTCCGCCATGCAGTACCTGCAGGGGAAAGGTCTCTGCCTTATGCCGATTTCTCTGGCCACAGCCATCTCCAAAGCCACGTGTCACGCCAGGAACCCTTTCATCAACGGTGATGGGCCCTCCTCTCCCGGAATGTCCGCGCTCACCCTGCACTCTTCCACTCTCAGCAATGGCCTCGTGAAAGACACCGCCTCCGTTTCCAAGTCCTGA 1062 0.564 MLSNLPSSPWTLEPKPNPNPLWDPNSDETTPDNNVLYPYDLQQANLASKFRNHHITDDKASALMLQHHQLLLSSAAAAAAANSPLLQMPVSSLNDVVHAPSFKSPTPNADPSSVQPLYNAFSASLQGGAAQPSNQTHHFQLPQQGQSFGASAPASGASGQPKQRVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVKVLSMSRLGGAAAVAPLVADISSEGGGDCVQPKSNNANGNSNDTLATTEQQVAKLMEEDMGSAMQYLQGKGLCLMPISLATAISKATCHARNPFINGDGPSSPGMSALTLHSSTLSNGLVKDTASVSKS* 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g02392 353 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 171 220 IPR011598 GO:0046983
Phac3g02392 353 MobiDBLite consensus disorder prediction 145 179 - -
Phac3g02392 353 MobiDBLite consensus disorder prediction 1 33 - -
Phac3g02392 353 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 169 231 IPR036638 GO:0046983
Phac3g02392 353 Pfam Helix-loop-helix DNA-binding domain 176 221 IPR011598 GO:0046983
Phac3g02392 353 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 57 307 - -
Phac3g02392 353 Gene3D - 166 228 IPR036638 GO:0046983
Phac3g02392 353 FunFam Transcription factor bHLH66 168 233 - -
Phac3g02392 353 SMART finulus 177 226 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g02392 Phac-Chr3 26820645 26824504 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g02392 160 342 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G24260 69.841 2.05e-89 267
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Phac3g02392 HLH 1.2e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g02392 - - gmx:100801457 417.157