Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g02377 ATGGGGTTGGGAGTGTTTGGTTCTGTTCTGGTTTTGGCACTCTTATTCAAGCATTTGGCATCTCAGCAACCAAATACCGATGGGTTCTTTGTATCTGAGTTCTTGAAAAATATGAGTTTAACATCCTCAAAAGCCTACAATTTCTCTGCTTCTGTCTGTTCATGGCAAGGGGTTTCTTGTGATGCCGATAGAGAACATGTTGTTGACTTGGTCTTTTCCGGTATGGACCTCTCTGGCACTATACCTGATAACACCATAGGCAAGCTAGGCAAACTTCAATCTTTGGATCTTAGCCACAACAAAATCACTGGCTTGCCTTCAGATTTTTGGAGCTTAAGCTCCCTCAAGAACCTTAACCTCTCCTCGAATCATATTTCTGGTTCATTGACTAGCAACATTGCCAACTTTGGTTTGCTAGAAAGCATTGACTTGTCCAGCAACAATTTCTCTGAGGAAATTCCTGAAGCTGTCTGCTCACTGCTGAGTCTACGGGTCTTCAAACTCGACCACAACAGGTTTGCACACAACATACCTTCTGGGATTCTCAAGTGCCAGTCTCTAGTTTCAATTGATCTTTCATCAAATCAGCTCAATGGAACACTACCAGAAGGTTTTGGTGCTGCTTTTCCTAAGCTTAGGATATTGAACCTTGCTGGGAATAATTTGTACGGTCGTGTTTCAGATATTTCTGGGTTAAAGTCCATTGCTAATCTCAACATATCAGGGAATTCGTTTCAGGGTTCCATTGTGGACGTGTTTCAGGGAAGGTTGGAGGTTCTGGACATTAGCAGAAACCAATTTCAAGGCCACATTCCACAGGTACTGTACAACTTTAGTGGTTACAATTGGTCTCATTTAGTTTACCTGGATTTGTCAGAGAATAAGCTTAGTGGGGAGTTTTTTCAAAATTTGAACGAGTCCTTGTTGAATTTAAAGCACATTAATCTTGCTCACAATAGATTTACCATACAGAAATTGCCCCAAATTGAAATGCTACTGAATTTGGAATATCTGAACTTGTCCAAAACTAGCCTTGTCGGTGAAATTCCTGGTAAAATCTCCCAATTAAGCAATTTGAATGCACTTGATCTTTCTTTGAATCATTTGAGTGGGAAAATTCCTTCACTGAGGAATGAAAACCTCCAAGTCCTAGACCTCTCATACAACAATTTGACCGGAGCAGTCCCTCAATCTGTCTTGGACAAACTCCCACGGATGGAGAAATACAACTTCTCTTATAATAACCTAACCCTTTGTGCTTCTGAAATCAAACCTGAGATCCTGCAAACATCATTCTTTGGATCACTGAACAGTTGTCCAATTGCTGCAAACCCGCGACTCTTCAAAAGAAGAGACACTGGACACACGGGAATGAAGCTAGCCCTGGCACTGACCTTCTCAATGATCTTTGTGCTTGCTGGGCTTTTGTTTCTAGCATTTGGTTGCAGAAGGAAAACAAAAATGTGGGAATTCAAGCAATCTTCGTACAAAGAGGAACAAAACATTTCAGGTCCCTTTTCATTTCAGACTGATTCAACGACATGGGTGGCTGATGTTAAGCAAGCAACATCAGTCCCAGTAGTAATCTTTGAGAAGCCATTGTTGAATATCACATTTGCAGACCTCTTGGCTGCAACTTCCAACTTTGACAGGGGCACCCTTTTGGCTGAGGGAAAATTTGGGCCAGTCTATAGAGGATTTCTGCCTGGTGGTATTCATGTGGCAGTTAAAGTTTTGGTTGTTGGTTCTACATTAACAGATGAGGAGGCTGCAAGAGAGCTAGAGTTTCTTGGTAGAATCAAGCACCCGAATCTTGTTCCTTTAACTGGATATTGTGTTGCTGGGGACCAAAGAATTGCCATATATGATTACATGGAGAATGGTAACTTGCAAAACCTGCTTTACGACCTGCCACTTGGGGTACAAAGCACAGATGATTGGAGCACAGACACATGGGAAGAAGCTGACAACAATGGAATTCAAAATGCTGGCTCTGAAGGGCTACTCACATCTTGGAGATTTCGCCACAAGATAGCCCTTGGCACGGCTCGAGCATTGGCATTTTTGCATCACGGTTGCTCCCCTCCAATAATCCACAGAGCAGTTAAGGCTAGCAGTGTTTATTTGGACTATGACTTGGAGCCAAGGTTGTCTGATTTTGGACTGGCCAAGATTTTTGGAAGTGGCTTGGATGATGAAATTGCGCGTGGCTCACCTGGTTATGTTCCACCAGAGTTTACTCAACCAGAATTGGACACACCAACCCCAAAATCTGATGTGTACTGTTTTGGGGTGGTGCTCTTTGAGCTAGTAACTGGAAAGAAGCCAGTTGGAGATGAGTACCCTGATGATAAAGAGACAACTTTGGTGAGTTGGGTCAGAGGTCTTGTGAGAAAGAACCAAGCTTCAAGAGCTATTGATCAAAAAATTCGTGACACAGGACCAGATGAACAAATGGAAGAGGCTCTTAAGATTGCTTATCTTTGCACTGCTGACCATCCCTTCAAACGACCAAGCATGCAACAGATAGTTGGACTTCTAAAGGATATTGAACCTACTGCTGATTAG 2568 0.426 MGLGVFGSVLVLALLFKHLASQQPNTDGFFVSEFLKNMSLTSSKAYNFSASVCSWQGVSCDADREHVVDLVFSGMDLSGTIPDNTIGKLGKLQSLDLSHNKITGLPSDFWSLSSLKNLNLSSNHISGSLTSNIANFGLLESIDLSSNNFSEEIPEAVCSLLSLRVFKLDHNRFAHNIPSGILKCQSLVSIDLSSNQLNGTLPEGFGAAFPKLRILNLAGNNLYGRVSDISGLKSIANLNISGNSFQGSIVDVFQGRLEVLDISRNQFQGHIPQVLYNFSGYNWSHLVYLDLSENKLSGEFFQNLNESLLNLKHINLAHNRFTIQKLPQIEMLLNLEYLNLSKTSLVGEIPGKISQLSNLNALDLSLNHLSGKIPSLRNENLQVLDLSYNNLTGAVPQSVLDKLPRMEKYNFSYNNLTLCASEIKPEILQTSFFGSLNSCPIAANPRLFKRRDTGHTGMKLALALTFSMIFVLAGLLFLAFGCRRKTKMWEFKQSSYKEEQNISGPFSFQTDSTTWVADVKQATSVPVVIFEKPLLNITFADLLAATSNFDRGTLLAEGKFGPVYRGFLPGGIHVAVKVLVVGSTLTDEEAARELEFLGRIKHPNLVPLTGYCVAGDQRIAIYDYMENGNLQNLLYDLPLGVQSTDDWSTDTWEEADNNGIQNAGSEGLLTSWRFRHKIALGTARALAFLHHGCSPPIIHRAVKASSVYLDYDLEPRLSDFGLAKIFGSGLDDEIARGSPGYVPPEFTQPELDTPTPKSDVYCFGVVLFELVTGKKPVGDEYPDDKETTLVSWVRGLVRKNQASRAIDQKIRDTGPDEQMEEALKIAYLCTADHPFKRPSMQQIVGLLKDIEPTAD* 856
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g02377 855 SUPERFAMILY L domain-like 228 417 - -
Phac3g02377 855 Gene3D Phosphorylase Kinase; domain 1 509 624 - -
Phac3g02377 855 SMART LRR_typ_2 209 232 IPR003591 -
Phac3g02377 855 SMART LRR_typ_2 89 111 IPR003591 -
Phac3g02377 855 SMART LRR_typ_2 379 402 IPR003591 -
Phac3g02377 855 SMART LRR_typ_2 160 184 IPR003591 -
Phac3g02377 855 SMART LRR_typ_2 112 136 IPR003591 -
Phac3g02377 855 FunFam Calmodulin-binding receptor kinase CaMRLK 255 376 - -
Phac3g02377 855 SUPERFAMILY Protein kinase-like (PK-like) 526 847 IPR011009 -
Phac3g02377 855 Gene3D Transferase(Phosphotransferase) domain 1 625 854 - -
Phac3g02377 855 PRINTS Leucine-rich repeat signature 92 105 - -
Phac3g02377 855 PRINTS Leucine-rich repeat signature 356 369 - -
Phac3g02377 855 Pfam Leucine Rich repeat 378 393 IPR001611 GO:0005515
Phac3g02377 855 Pfam Protein tyrosine and serine/threonine kinase 553 846 IPR001245 GO:0004672|GO:0006468
Phac3g02377 855 Gene3D Ribonuclease Inhibitor 30 177 IPR032675 -
Phac3g02377 855 ProSiteProfiles Leucine-rich repeat profile. 358 380 IPR001611 GO:0005515
Phac3g02377 855 SUPERFAMILY L domain-like 42 278 - -
Phac3g02377 855 FunFam Putative LRR receptor-like serine/threonine-protein kinase 510 624 - -
Phac3g02377 855 Gene3D Ribonuclease Inhibitor 178 275 IPR032675 -
Phac3g02377 855 ProSiteProfiles Leucine-rich repeat profile. 91 112 IPR001611 GO:0005515
Phac3g02377 855 Gene3D Ribonuclease Inhibitor 276 445 IPR032675 -
Phac3g02377 855 FunFam Nuclear pore complex protein NUP107 30 179 - -
Phac3g02377 855 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 228 850 - -
Phac3g02377 855 Pfam Leucine rich repeat 162 222 IPR001611 GO:0005515
Phac3g02377 855 Pfam Leucine rich repeat 81 125 IPR001611 GO:0005515
Phac3g02377 855 ProSiteProfiles Protein kinase domain profile. 549 854 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g02377 Phac-Chr3 26690624 26694096 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g02377 77 851 Receptor kinase-like Gene Family AT1G55610 34.487 3.86e-110 363
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-2 Phac3g02377 PK_Tyr_Ser-Thr 2.9e-32 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g02377 - - gmx:100797738 1543.48