Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g02375 ATGGCTGAGCGCCGCAGCCCCCAAGCTCTCCCAGAGCCACACCCCAAGCCAAACGATTCTGACCAAGAACAGCACGACGCCAACCAAACACAACGACTCACCGAATCGCCCTCCGCCGCCGAGTCGCAGGGCGTCGAGTTACGGAGTTCTGACGAGCGTCGTACGGAGTCCAATTTAGAAACCCTAGGCGGTGCTGTTACCTCTTCGGTTCAAACCCTTGCTGTGCAGCACCATCGCAGTGACGATTTGCAAGGGAGCTCTGCTGCGTCGAATTCCAGTGGCAAAGCCGAAAGTAAGGAGACAGTTGCATCTCCTGAAAAAGAAATTATTCAAAGAGGAGCAGCCCAGCCACTTCCAACTCAGACAAATCGGCTTCAGCTGTCTGTGTGTTCAACTCCATTGTCTGAACTACCACCAACTTCTGTTACACAATCTTTATCATCTGTTTCTAGTCCAACTGCACCAAAACAAAAATTATCTACTCCAAAGGTCAATAATGCACATTTGCCAGAAGTAGATAAGAAAAATCCTTCTGGTGGCAAAGCCTTATCTGCTGTTTCTGTTGCGAGGTCATCAGCATCTGATGGATATAACTGGCGCAAGTATGGTCAGAAGCAAGTGAAGAGTCCTACAGGTTCTCGAAGCTATTACAGGTGCACTCATTCAGACTGTTTTGCTAAGAAGATTGAATGCTGTGATCATTCTGGTCATGTGATAGAGATTGTTTATAAAAGTGAGCATAGTCATGATCCCCCACGGAAGACTAATTCTCTTAGGGAAAATAAGTTTCTGTCTGCCAGTGAACCTATTGTAGAAAACAGTGTTCCAGATCAGCCTGTCAGACTTCTGAAGGATCCCGATCCATCTATTTCTTCAAAAGAATCTCTACAAGGACCCTGCAGCTCTGATAAGAAACGGCCAAACTCATCTAGTATCAGTGGTGATGGTAAAGTTATTTTGAAAGAGGAACATGTAAATGAGCCTGAGCCGAAAAAAAGAATGAAGAAAGGCGACTTAACAGACATGGATTCTCCTGTAAAACCTGGAAAGAAGCCCAAGTTTGTCATACATGCAGCAGGGGATGTGGGGATATCTGGTGATGGTTACCGATGGCGCAAGTATGGGCAGAAAATGGTGAAGGGAAATCCGCATCCCAGGAACTACTACAGATGCACTTCTGCTGGATGTCCTGTTAGAAAGCACATTGAATCTGCCGTAGATAACTCAGATGCCGTCATTATAACATACAAGGGTGTACATGACCATGACATGCCTGTGCCCAAGAAACGACATGGGCCACCAAGTGCTCCTCTTGTGGCAGCTGCAGCACCCACCTCCATGAACAGTTTACAGGTGAAGAAACCCAATTCTCCACATAACAAGAAAGTTTCTACTCAATGGTCTGTGGACACCGAAGGAGAACTAACTGGGGAAGCCCTGGAGCTTGGGGGTGAGAAAGCAATGGAATCAGCTCGAACGCTTCTGAGCATAGGTTTTGAAATTAAGCCTTGCTGA 1515 0.4667 MAERRSPQALPEPHPKPNDSDQEQHDANQTQRLTESPSAAESQGVELRSSDERRTESNLETLGGAVTSSVQTLAVQHHRSDDLQGSSAASNSSGKAESKETVASPEKEIIQRGAAQPLPTQTNRLQLSVCSTPLSELPPTSVTQSLSSVSSPTAPKQKLSTPKVNNAHLPEVDKKNPSGGKALSAVSVARSSASDGYNWRKYGQKQVKSPTGSRSYYRCTHSDCFAKKIECCDHSGHVIEIVYKSEHSHDPPRKTNSLRENKFLSASEPIVENSVPDQPVRLLKDPDPSISSKESLQGPCSSDKKRPNSSSISGDGKVILKEEHVNEPEPKKRMKKGDLTDMDSPVKPGKKPKFVIHAAGDVGISGDGYRWRKYGQKMVKGNPHPRNYYRCTSAGCPVRKHIESAVDNSDAVIITYKGVHDHDMPVPKKRHGPPSAPLVAAAAPTSMNSLQVKKPNSPHNKKVSTQWSVDTEGELTGEALELGGEKAMESARTLLSIGFEIKPC* 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g02375 504 ProSiteProfiles WRKY domain profile. 360 425 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phac3g02375 504 ProSiteProfiles WRKY domain profile. 188 252 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phac3g02375 504 MobiDBLite consensus disorder prediction 115 164 - -
Phac3g02375 504 Pfam WRKY DNA -binding domain 195 249 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phac3g02375 504 Pfam WRKY DNA -binding domain 367 422 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phac3g02375 504 MobiDBLite consensus disorder prediction 29 45 - -
Phac3g02375 504 MobiDBLite consensus disorder prediction 268 352 - -
Phac3g02375 504 SUPERFAMILY WRKY DNA-binding domain 191 252 IPR036576 GO:0003700|GO:0006355|GO:0043565
Phac3g02375 504 SUPERFAMILY WRKY DNA-binding domain 361 425 IPR036576 GO:0003700|GO:0006355|GO:0043565
Phac3g02375 504 MobiDBLite consensus disorder prediction 1 181 - -
Phac3g02375 504 MobiDBLite consensus disorder prediction 60 99 - -
Phac3g02375 504 Gene3D WRKY domain 351 426 IPR036576 GO:0003700|GO:0006355|GO:0043565
Phac3g02375 504 Gene3D WRKY domain 180 253 IPR036576 GO:0003700|GO:0006355|GO:0043565
Phac3g02375 504 MobiDBLite consensus disorder prediction 290 315 - -
Phac3g02375 504 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 106 453 IPR044810 GO:0003700
Phac3g02375 504 MobiDBLite consensus disorder prediction 317 350 - -
Phac3g02375 504 FunFam WRKY transcription factor 354 426 - -
Phac3g02375 504 SMART WRKY_cls 365 424 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phac3g02375 504 SMART WRKY_cls 193 251 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g02375 Phac-Chr3 26664724 26671230 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g02375 128 504 WRKY Transcription Factor Family AT4G30935 56.477 4.00e-133 392
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Phac3g02375 WRKY 2.3e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g02375 - - gmx:100127377 808.52