Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g02366 ATGATGTTTGACTGTGGTCACAAGTCAGAATACATGGGTGGCCAGCGGGAAAATTTTTTGAGGTTGGAGGCCTTGGATTCTACACTATCTTCATCTTCTGATGCTGGAGTTATAAAATCTGGATTTAGTATTGATAAATTAGGCCATGGTGGTCACGGAAGCAGCACGACTTCTAGGTCTTTTAAAAGGGGTATGAGAAGGGGATCTGAAGGGCTGAAATCAATTGGGCGATCGCTTGGGTTGGGAGTATCTAGGGCAGTATTCCCAGAAGATCTTAAAGTGTCAGAAAAGAAGATATTTGACCCTCAAGACAAATTCCTGCTCTTATGGAATAAACTCTTTGTTATCTCATGCATTTTGGCTGTGTCTATAGATCCACTGTTTTTTTATCTCCCAGTCATTAATAGTTCATTTCACTGTCTTGGCATAGACCGAAAGTTGGCGACAATAGTTACAACGTTAAGGACAGTGATTGATGCTTTCTATCTTATACACATGGCTCTCCAATTTCGTACTGCTTATATTGCTCCATCTTCTCGTGTCTTTGGGCGGGGCGAGCTTGTGATAGATTCGGCACAGATAGCCAAACGATACTTGCAGCGGTATTTCATCATTGATTTCCTATCAGTGTTGCCTATACCACAGATTGTGGTTTGGAGATTTCTTCTGAGGTCAAAAGGTTCAGATGTGCTAACAACAAAGCAGGCCTTGCTATTCATTATCTTGTTTCAGTATGTTCCTAGATTTCTCCGAATGGTACCATTGACTTCAGAGCTTAAGAGAACAGCTGGTGTTTTTGCTGAAACTGCATGGGCTGGTGCTGCATATTATTTGCTGCTATACATGCTTGCCAGTCATATAGTTGGTGCATTTTGGTACTTGTTAGCTATTGAACGCAATGACTCATGCTGGCAGAAAGCTTGCAGTGACATTGACAATTTGTGCAATAAAAATTTCCTTTATTGTGGGAACCAGCACATGAAAGGTTATAGTGCTTGGCATAATAGAAGTGAAGATATTCTAAAGTCAACATGCTCTGCAGATGGTGATCCTCCACCTTTTGATTATGGAATTTTCAAGCAAGTCTTGTCTTCTGGCATAATTTCATCTAAGAAATTCATCTCCAAATACTGTTACTCTTTATGGTGGGGGCTCCAGAATTTGAGTACACTTGGCCAGGGGCTTCAAACTAGCACCTATCCTGGGGAGGTTATCTTTTCAATAGCACTAGCTATTTTTGGTCTCATCCTCTTTGCACTTCTGATTGGCAACATGCAGACATATCTTCAGTCTCTCACCATTAGACTAGAGGAAATGAGAGTTAAAAGGCGTGATTCAGAACAGTGGATGCATCATCGGTTACTCCCACAAGAGCTTAGAGAGCGTGTGAGACGGTATGATCAATATAAGTGGCTGGCAACTCGTGGTGTAGATGAAGAAAATTTAGTTCAGAGTCTACCAAAGGATCTTCGAAGAGATATTAAGCGTCATCTCTGTTTGGCCTTAGTGAGGAGGGTTCCACTATTTGAGAGTATGGATGAGAGATTGCTTGATGCCATCTGTGAGAGACTGAAACCATGTTTATTTACAGAGCATACTTACATCGTTCGGGAAGGAGATCCAGTTGATGAGATGCTTTTCATCATACGTGGTCGCCTTGAGAGTGTTACCACAGATGGTGGGAGGAGTGGATTTTTCAACCGCAGTTTTCTGAAGGAAGCGGACTTCTGTGGGGAGGAGCTATTAACCTGGGCCCTGGATCCCAAATCTGGTTCTAATCTCCCATCTTCTACTAGAACAGTTAAAGCATTAATGGAGGTTGAGGCTTTTGCCTTAACTGCTGATGAGTTAAAATTTGTTGCCAGTCAATTTAGACGCCTTCACAGTAGACAGGTTCAACACACTTTCCGATTTTACTCCCAGCAATGGAGGACTTGGGCTGCATGCTTTATTCAAGCAGCATGGCGTCGGTATTCTAAAAAGAAAATTATGAAGCTTCGTCAAAAGGAAGAAGATGCTGATGAATCAGAGGGAAGTCATGAAAATGCTGGTGGAAGTTCTTACAGCTTTGGTGCTGCCCTTTTAGCCTCAAAGTTTGCTGCACACACTCTTCGTGGCGTACATCGTAATCGACTTGCTAAGACTGCCAGAGAGTTGGTGAAACTACAGAAACCCCCAGAGCCTGATTTTTCTGCAGATGACGCTGACTAA 2211 0.4242 MMFDCGHKSEYMGGQRENFLRLEALDSTLSSSSDAGVIKSGFSIDKLGHGGHGSSTTSRSFKRGMRRGSEGLKSIGRSLGLGVSRAVFPEDLKVSEKKIFDPQDKFLLLWNKLFVISCILAVSIDPLFFYLPVINSSFHCLGIDRKLATIVTTLRTVIDAFYLIHMALQFRTAYIAPSSRVFGRGELVIDSAQIAKRYLQRYFIIDFLSVLPIPQIVVWRFLLRSKGSDVLTTKQALLFIILFQYVPRFLRMVPLTSELKRTAGVFAETAWAGAAYYLLLYMLASHIVGAFWYLLAIERNDSCWQKACSDIDNLCNKNFLYCGNQHMKGYSAWHNRSEDILKSTCSADGDPPPFDYGIFKQVLSSGIISSKKFISKYCYSLWWGLQNLSTLGQGLQTSTYPGEVIFSIALAIFGLILFALLIGNMQTYLQSLTIRLEEMRVKRRDSEQWMHHRLLPQELRERVRRYDQYKWLATRGVDEENLVQSLPKDLRRDIKRHLCLALVRRVPLFESMDERLLDAICERLKPCLFTEHTYIVREGDPVDEMLFIIRGRLESVTTDGGRSGFFNRSFLKEADFCGEELLTWALDPKSGSNLPSSTRTVKALMEVEAFALTADELKFVASQFRRLHSRQVQHTFRFYSQQWRTWAACFIQAAWRRYSKKKIMKLRQKEEDADESEGSHENAGGSSYSFGAALLASKFAAHTLRGVHRNRLAKTARELVKLQKPPEPDFSADDAD* 737
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g02366 736 CDD CAP_ED 508 639 IPR000595 -
Phac3g02366 736 FunFam Cyclic nucleotide-gated ion channel 1 435 499 - -
Phac3g02366 736 SMART cnmp_10 508 639 IPR000595 -
Phac3g02366 736 SUPERFAMILY cAMP-binding domain-like 437 628 IPR018490 -
Phac3g02366 736 Gene3D Helix hairpin bin 436 499 - -
Phac3g02366 736 SUPERFAMILY Voltage-gated potassium channels 101 430 - -
Phac3g02366 736 FunFam Cyclic nucleotide-gated ion channel 1 506 624 - -
Phac3g02366 736 ProSiteProfiles cAMP/cGMP binding motif profile. 508 592 IPR000595 -
Phac3g02366 736 Pfam Ion transport protein 109 434 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Phac3g02366 736 Pfam Cyclic nucleotide-binding domain 529 619 IPR000595 -
Phac3g02366 736 Gene3D - 112 433 - -
Phac3g02366 736 Gene3D Jelly Rolls 506 626 IPR014710 -
Phac3g02366 736 PRINTS EAG/ELK/ERG potassium channel family signature 471 478 IPR003938 GO:0005249|GO:0006813|GO:0016020
Phac3g02366 736 PRINTS EAG/ELK/ERG potassium channel family signature 421 430 IPR003938 GO:0005249|GO:0006813|GO:0016020
Phac3g02366 736 PRINTS EAG/ELK/ERG potassium channel family signature 377 394 IPR003938 GO:0005249|GO:0006813|GO:0016020
Phac3g02366 736 PRINTS EAG/ELK/ERG potassium channel family signature 166 175 IPR003938 GO:0005249|GO:0006813|GO:0016020
Phac3g02366 736 PRINTS EAG/ELK/ERG potassium channel family signature 403 414 IPR003938 GO:0005249|GO:0006813|GO:0016020
Phac3g02366 736 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 91 730 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g02366 Phac-Chr3 26619561 26628239 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g02366 2 734 Ion Channels AT2G23980 75.766 0.0 1152
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g02366 K05391 - gmx:100784309 1333.55