Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g02359 ATGGAATTCAAGTTTCGTGATGGCGAAAACCGAAGCATTCCCACACTGTCACCACAGCAGCGCCCTCTCTCCATCGTCCCTTTAGTCTCCGGTCACCCATTACGAGGTGGTTTTCCAAGTCCTGGTGGTTTTTCGTGTTCAGGTGGTTTTCCGAGTATTATCCCGTCGTCGCCGTCGCCGAGAGTATACCCGATCAATGCCGAGGAAGCGATCCGGCGAGACATGGTAAGGGAGCAGGTAAGGCGGGAACTGGAGAAGGAGGAAATAAGGAGAGAGATTCTGGCCAGGGAGATGGCATGGCGACGTGAGTTGGAGGAGGAGGTTAGGAGGGAACTGGCGTCGGAGAGAGCACTGAGAATGCCCATGCACAGGATGGAAGAAGTCACATTTGGTGAACGAGTCTTCTCGTTGTCTATGAACCCAGGAATGAGACTGAACAACCCTGATCATAACAACAACATATATTCTGGACCACAACCTCAGTTAGCCCCTAAAGTTGACATCACACAGTTCAAAAAGCAGATACCAGATGAAACTAACCAGGATAAAATAATAAAATTGGCTAAGCCAAATGCTGATCTTCTTAGTTTGAAGTGCAAAGAGGTGCTAGATGTTAACCATGGTGGTGCGAAGCGCAAACTGGTGACACCTTGTCCAGGTGATAACAATCATGCTGGATCTAGCTTGCAGAAGAAACCCAAGAAGGAGTGGAGTTGTGCATTATGTCAGATTGTTGCCACAAGTGAAAAGGGCTTGAATGATCATCTTCAAGGGAAAAAGCACAAGGTTAAAGAAGCATCTCTTACAACTAAACAAATGGGGTTGGATGCAAGACAGGATGGTGAAACACTTGGATCTGGCATTAGTTCTGTAGACAAAGGCAAAGACAAGGTAGAACTCATAAAAATGGATTTGGCTGTGCAGAAAAGTCACGATTCAGGTGGCATAGATACTGAAAATGAAGCAACCATTGAGAAAGAAGTTCTGAAAACAAAGGCATTAACAACAAGGAAGAAGTTTAAATTTTATTGTGCATTTTGTCAAGTTCGAACTCACTCAGAAGTTGTCATGGAAAGTCATAAAAGTGGAAAAAGGCATCTGGCTAATATTACAAAACTTAACCCAAACAATTCTGCTGGAGCTTGTGCTGCTGCAAATTCGGAGTAA 1167 0.4473 MEFKFRDGENRSIPTLSPQQRPLSIVPLVSGHPLRGGFPSPGGFSCSGGFPSIIPSSPSPRVYPINAEEAIRRDMVREQVRRELEKEEIRREILAREMAWRRELEEEVRRELASERALRMPMHRMEEVTFGERVFSLSMNPGMRLNNPDHNNNIYSGPQPQLAPKVDITQFKKQIPDETNQDKIIKLAKPNADLLSLKCKEVLDVNHGGAKRKLVTPCPGDNNHAGSSLQKKPKKEWSCALCQIVATSEKGLNDHLQGKKHKVKEASLTTKQMGLDARQDGETLGSGISSVDKGKDKVELIKMDLAVQKSHDSGGIDTENEATIEKEVLKTKALTTRKKFKFYCAFCQVRTHSEVVMESHKSGKRHLANITKLNPNNSAGACAAANSE* 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g02359 388 Coils Coil 77 97 - -
Phac3g02359 388 SMART c2h2final6 237 261 IPR013087 -
Phac3g02359 388 SMART c2h2final6 342 366 IPR013087 -
Phac3g02359 388 SMART ZnF_U1_5 339 373 IPR003604 GO:0003676|GO:0008270
Phac3g02359 388 SMART ZnF_U1_5 234 268 IPR003604 GO:0003676|GO:0008270
Phac3g02359 388 SUPERFAMILY beta-beta-alpha zinc fingers 340 372 IPR036236 -
Phac3g02359 388 SUPERFAMILY beta-beta-alpha zinc fingers 216 270 IPR036236 -
Phac3g02359 388 Gene3D Classic Zinc Finger 323 372 - -
Phac3g02359 388 Gene3D Classic Zinc Finger 221 267 - -
Phac3g02359 388 PANTHER OS06G0651300 PROTEIN-RELATED 1 377 - -
Phac3g02359 388 Pfam Zinc-finger of C2H2 type 342 366 - -
Phac3g02359 388 Pfam Zinc-finger of C2H2 type 237 261 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g02359 Phac-Chr3 26561028 26564567 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g02359 237 370 C2H2 Transcription Factor Family AT2G19380 26.119 7.48e-07 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g02359 - - pvu:PHAVU_003G155200g 461.84