Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g02358 ATGGAATTCAAGTTTCGTGATGGCGAAAACCGAAGCATTCCCACACTGTCACCACAGCAGCGCCCTCTCTCCATCGTCCCTTTAGTCTCCGGTCACCCATTACGAGGTGGTTTTCCAAGTCCTGGTGGTTTTTCGTGTTCAGGTGGTTTTCCGAGTATTATCCCGTCGTCGCCGTCGCCGAGAGTATACCCGATCAATGCCGAGGAAGCGATCCGGCGAGACATGGTAAGGGAGCAGGTAAGGCGGGAACTGGAGAAGGAGGAAATAAGGAGAGAGATTCTGGCCAGGGAGATGGCATGGCGACGTGAGTTGGAGGAGGAGGTTAGGAGGGAACTGGCGTCGGAGAGAGCACTGAGAATGCCCATGCACAGGATGGAAGAAGTCACATTTGGTGAACGAGTCTTCTCGTTGTCTATGAACCCAGGAATGAGACTGAACAACCCTGATCATAACAACAACATATATTCTGGACCACAACCTCAGTTAGCCCCTAAAGTTGACATCACACAGTTCAAAAAGCAGATACCAGATGAAACTAACCAGGATAAAATAATAAAATTGGCTAAGCCAAATGCTGATCTTCTTAGTTTGAAGTGCAAAGAGGTGCTAGATGTTAACCATGGTGGTGCGAAGCGCAAACTGGTGACACCTTGTCCAGGTGATAACAATCATGCTGGATCTAGCTTGCAGAAGAAACCCAAGAAGGAGTGGAGTTGTGCATTATGTCAGATTGTTGCCACAAGTGAAAAGGGCTTGAATGATCATCTTCAAGGGAAAAAGCACAAGGTTAAAGAAGCATCTCTTACAACTAAACAAATGGGGTTGGATGCAAGACAGGATGGTGAAACACTTGGATCTGGCATTAGTCCTGCAGACAAAGACAAAGGCAAAGGCAAAGTAGAACTCAGTGCATTATGTCAGATTGTTGCCACAAGTGAAAAGGGCTTGAATGATCATCTTCAAGGGAAAAGCCACAACGTTAAAGCAGCGTCCCTTAAAACTCAAAAAATGGGGTTGGATGCAAGACAGGATGGTGAAACACTTGGATCTGGCATTAGTTCTGTAGACAAAGGCAAAGACAAGGTAGAACTCATAAAAATGGATTTGGCTGTGCAGAAAAGTCACGATTCAGGTGGCATAGATACTGAAAATGAAGCAACCATTGAGAAAGAAGTTCTGAAAACAAAGGCATTAACAACAAGGAAGAAGTTTAAATTTTATTGTGCATTTTGTCAAGTTCGAACTCACTCAGAAGTTGTCATGGAAAGTCATAAAAGTGGAAAAAGGCATCTGGCTAATATTACAAAACTTAACCCAAACAATTCTGCTGGAGCTTGTGCTGCTGCAAATTCGGAGTAA 1359 0.4452 MEFKFRDGENRSIPTLSPQQRPLSIVPLVSGHPLRGGFPSPGGFSCSGGFPSIIPSSPSPRVYPINAEEAIRRDMVREQVRRELEKEEIRREILAREMAWRRELEEEVRRELASERALRMPMHRMEEVTFGERVFSLSMNPGMRLNNPDHNNNIYSGPQPQLAPKVDITQFKKQIPDETNQDKIIKLAKPNADLLSLKCKEVLDVNHGGAKRKLVTPCPGDNNHAGSSLQKKPKKEWSCALCQIVATSEKGLNDHLQGKKHKVKEASLTTKQMGLDARQDGETLGSGISPADKDKGKGKVELSALCQIVATSEKGLNDHLQGKSHNVKAASLKTQKMGLDARQDGETLGSGISSVDKGKDKVELIKMDLAVQKSHDSGGIDTENEATIEKEVLKTKALTTRKKFKFYCAFCQVRTHSEVVMESHKSGKRHLANITKLNPNNSAGACAAANSE* 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g02358 452 Coils Coil 77 97 - -
Phac3g02358 452 Pfam Zinc-finger of C2H2 type 237 261 - -
Phac3g02358 452 Pfam Zinc-finger of C2H2 type 406 430 - -
Phac3g02358 452 Pfam Zinc-finger of C2H2 type 305 325 - -
Phac3g02358 452 Gene3D Classic Zinc Finger 221 267 - -
Phac3g02358 452 Gene3D Classic Zinc Finger 387 436 - -
Phac3g02358 452 PANTHER OS06G0651300 PROTEIN-RELATED 304 441 - -
Phac3g02358 452 SUPERFAMILY beta-beta-alpha zinc fingers 216 270 IPR036236 -
Phac3g02358 452 SMART ZnF_U1_5 234 268 IPR003604 GO:0003676|GO:0008270
Phac3g02358 452 SMART ZnF_U1_5 305 332 IPR003604 GO:0003676|GO:0008270
Phac3g02358 452 SMART ZnF_U1_5 403 437 IPR003604 GO:0003676|GO:0008270
Phac3g02358 452 SMART c2h2final6 237 261 IPR013087 -
Phac3g02358 452 SMART c2h2final6 406 430 IPR013087 -
Phac3g02358 452 SUPERFAMILY beta-beta-alpha zinc fingers 404 436 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g02358 Phac-Chr3 26561028 26564567 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g02358 236 434 C2H2 Transcription Factor Family AT2G19380 24.155 2.78e-07 51.2