Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g02353 ATGCAGCAGAGTGATCAGACGGTGTTGAGTTTGAGGCCCGGCGGTGGAAAAGGCAGCAGACCCCTCGGCCCTCGATTCGACTCCTCCACCTCGTCTTCTGCTTCCCCTGCTTTTGGCTCTTTTTCTGCTGATCTTCCTCTCCTGCGTCCCCATGGCGGGACTCCCTCTCCCTTCTCTATCAAGGCTGGAGATTCACGGTTTGAGGGCCGTGAGCGCGTGCGATATACAAGGGAGCAGCTTTTACAACTCAGTCAGGGTGTTGAGATTCTTGATGATGTGTTGAAGATCAAACAAGATATTGAAGCTGAACTTTTTGGTGAAGATCAAAGTTGGGCCCGCCCAGAAAGCAATCCCTCAAATCAATTTCAAAATCGATATTCTGAGCCAGATAATCGTGACTGGCGTGGACGATCTGGCCAACCTTTTGGTAATACAGATGAGAGGTCTTGGGATAATCTCAAGGAGAATAAGGAGTTTGGAAATAATCGTCAAGACCAAATGAATTCTCAGTTTGCAAGGGCACAGATATCTTCTAACCAAGGGGGCGGACCTACTCCAACACTAGTCAAGGCTGAGGTGCCGTGGTCAGCTAGAAAGGGAACTCTCTCTGAAAAGGATCGTGTCTTAAAGACAGTTAAAGGAATACTAAATAAGTTGACTCCTGAGAAATTTGATCTCTTGAAGGGTCAGTTGATTGATTCTGGCATTACATCTGCCGACATATTGAAGGGAGTTATATCACTGATATTTGATAAGGCAGTGCTAGAGCCAACATTTTGCCCAATGTATGCCCAGCTGTGTTCTGATCTTAATGAAAAGCTGCCTCCATTCCCATCTGATGAGCCTGGTGGGAAGGAAATCACTTTTAAGAGAGTACTCTTGAATATCTGCCAGGAGGCTTTTGAAGGTGCAGATAACCTGAGGGAAGAAGTGAGACAGATGATTGCTCCTGAGCAGGAGATGGAGCGAAGGGATAAGGACAGACTTGTCAAGATTCGAACCCTTGGAAACATTCGTTTAATTGGTGAGCTGTTGAAGCAAAAAATGGTTCCGGAAAAGATTGTTCATCACATTGTTCAGGAGCTTTTAGGTCCTGCTGACAGCAAGATCTGTCCAGCAGAGGAAAATGTTGAAGCCATTTGTCAATTTTTCAACACTATTGGTAAGCAGCTTGATGAAAGCCCAAAATCGCGGCGTATAAATGATATGTACTTCAGTCGTTTGAAAGAATTGAGCACCAATCCCCAACTTGTTCCACGGCTGCGGTTTATGGTTCGTGATGTTCTAGAGTTGCGTTCTAATAACTGGATTCCTAGACGTGAAGAGGTGAAAGCCAAAACCATCACTGAAATTCATTCAGAGGCAGAAAAAAATCTTGGATTGCGTCCAGGTGCCACTGCAAGCATGAGAAGTAGCCGTGTAGTTTCTGGTGTTCAAGGAAACGTCAATCCAGGAGGATTTGCAATTGCCCGACCTGGTACTGGCGGTATGATGCCTGGGATGCCGGGGACGAGGAGGATGCCTGGGATGCCGGGAATTGATAATGACAACTGGGAGGTGCCTAGGACAAGATCAATGCCGAGAGGAGACATGTCAGGCATGCAAACTGGAGGACGTGGTCAGTCTCCATTTATTTCTAAGACATCAACTGTTAATTCAAAGTTACTACCTCAAGGTAGTGGTGGTACTATAAGTGGGAGAAGCAGTGCCCTGGTGCATGGGGGTGGTGGTGCTCCTTCTGCTCGTCCACAAAACATTGGTGTTAGTGCTGAGCCCCCACCTCAAATTCCTTCACCTGTTAAAGTTGTTACTGCCATACCCTCTGAGAAGCCACAAGCTCCAGCTCCAAAATTGAATGTTGAGGAACTTCAGCGCAAAACTAGTTCTCTTCTGGAGGAATATTTCAGTGTTCGGCTTTTGGATGAGGCATTGCAGTGTGTGGAGGAACTAAAAGCTCCAGCTTATCACCCTGAGGTTGTGAAGGAAGCCATTTCCCTTGGACTAGATAAAAGTCCGCCATGTGTTGAACCTGTTGGCAGTCTTATTGAGTATCTGTATGTTAAAAAGATTCTTTCAGCCAGAGACATAGGGACTGGGTGCATGTTATTTTCTTCTCTGCTGGATGATATCGGCATAGATTTACCTAAAGCACCAAATAATTTTGGTGAGATAATAGGGAAACTAGTTTTGGCTGGGACTTTGGATTTTAAGATGGTGAGAGAAATCCTGAAGAAGGTGGAGGATGACCGGTTCCAGAAAGCAATATTTTCCTCTGCATTGCAGGTAATTAGCTCTGCTGCATCTGGGCAAGCTGTGTTGGAATCGCAAGCATCTGATATTGAGGCCTGTCAGAGTCTGTTCAACTGA 2367 0.4588 MQQSDQTVLSLRPGGGKGSRPLGPRFDSSTSSSASPAFGSFSADLPLLRPHGGTPSPFSIKAGDSRFEGRERVRYTREQLLQLSQGVEILDDVLKIKQDIEAELFGEDQSWARPESNPSNQFQNRYSEPDNRDWRGRSGQPFGNTDERSWDNLKENKEFGNNRQDQMNSQFARAQISSNQGGGPTPTLVKAEVPWSARKGTLSEKDRVLKTVKGILNKLTPEKFDLLKGQLIDSGITSADILKGVISLIFDKAVLEPTFCPMYAQLCSDLNEKLPPFPSDEPGGKEITFKRVLLNICQEAFEGADNLREEVRQMIAPEQEMERRDKDRLVKIRTLGNIRLIGELLKQKMVPEKIVHHIVQELLGPADSKICPAEENVEAICQFFNTIGKQLDESPKSRRINDMYFSRLKELSTNPQLVPRLRFMVRDVLELRSNNWIPRREEVKAKTITEIHSEAEKNLGLRPGATASMRSSRVVSGVQGNVNPGGFAIARPGTGGMMPGMPGTRRMPGMPGIDNDNWEVPRTRSMPRGDMSGMQTGGRGQSPFISKTSTVNSKLLPQGSGGTISGRSSALVHGGGGAPSARPQNIGVSAEPPPQIPSPVKVVTAIPSEKPQAPAPKLNVEELQRKTSSLLEEYFSVRLLDEALQCVEELKAPAYHPEVVKEAISLGLDKSPPCVEPVGSLIEYLYVKKILSARDIGTGCMLFSSLLDDIGIDLPKAPNNFGEIIGKLVLAGTLDFKMVREILKKVEDDRFQKAIFSSALQVISSAASGQAVLESQASDIEACQSLFN* 789
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g02353 788 SMART if4_15 209 435 IPR003890 GO:0003723|GO:0005515
Phac3g02353 788 SUPERFAMILY ARM repeat 202 437 IPR016024 -
Phac3g02353 788 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA 56 776 IPR045208 GO:0003743
Phac3g02353 788 Pfam MIF4G domain 209 435 IPR003890 GO:0003723|GO:0005515
Phac3g02353 788 MobiDBLite consensus disorder prediction 1 64 - -
Phac3g02353 788 MobiDBLite consensus disorder prediction 108 151 - -
Phac3g02353 788 Pfam MA3 domain 623 735 IPR003891 -
Phac3g02353 788 MobiDBLite consensus disorder prediction 24 39 - -
Phac3g02353 788 FunFam Eukaryotic translation initiation factor isoform 4G-2 200 436 - -
Phac3g02353 788 Gene3D - 200 436 - -
Phac3g02353 788 ProSiteProfiles MI domain profile. 622 744 IPR003891 -
Phac3g02353 788 SMART ma3_7 623 735 IPR003891 -
Phac3g02353 788 MobiDBLite consensus disorder prediction 525 545 - -
Phac3g02353 788 MobiDBLite consensus disorder prediction 112 127 - -
Phac3g02353 788 Gene3D - 615 783 - -
Phac3g02353 788 FunFam Eukaryotic translation initiation factor isoform 4G-2 616 778 - -
Phac3g02353 788 SUPERFAMILY ARM repeat 616 775 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g02353 Phac-Chr3 26519841 26526158 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g02353 1 786 Eukaryotic Initiation Factors Gene Family AT5G57870 66.751 0.0 1011
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g02353 K03260 - gmx:100781275 1376.69