Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g02332 ATGATGGGCTTGTTTAGTTTAGCAGTGTTTCTATTTTTCTTTCTGGATACTGTTCATTCTACAGTTCTTTGGAAAGAAAATGCTGGCATCGTGAATGGAAAAAAATCACTTGTTTCATTCATGTCAGGCATTGTTTCAGACCCTCAAAACGCTCTAGATAGTTGGAAGTCACCCGGTGTTCATGTTTGTGATTGGTCAGGTGTGAGATGCAACAATGCAAGCGACATGATCGTAGAGGTTGATCTCAGTGGAAGGTCTCTAGGAGGCACCATTTCCCCTGCTCTTGCTAACCTCTCTTCCTTGCAAATTCTTGATCTTTCTGGGAACTTTTTGGTGGGTCAGATTCCAAAAGAAATAGGCCATTTGGTTCAGCTTAGACAACTCAGTTTGTCTGGGAATTTTCTTGAGGGTCACATTCCATCCGAGTTTGGTTCACTTCACAACTTGGACTACCTTGACTTACGAAGCAATCATCTTGAGGGAGAGATCCCCCCATCACTCTTCTGCAATGGGACTTCACTGGGTTATGTAGACCTCTCTAACAATTCCTTAGGGGGGCAAATCCCCTTGAATAAAGAGTGTATCCTTAAAGAACTCCAGTTCTTATTACTTTGGTCTAACAAGCTTTCAGGAAAAGTTCCTTTAGCACTTTCAAATTCTACCAAACTAAAATGGCTTGATTTGGGGTTGAATATGTTGAGTGGAGAGCTTCCTTCTAAGATTGTAAGTAACTGGCCACAACTACAATTCCTCTACTTGTCATACAACAATTTTACTAGCCATGATGATAATACCAACCTTGAGCCTTTCTTTGCTTCCTTGGTGAATTTATCACACTTTCAAGAACTTGAATTGGCGGGAAACAATCTTGGTGGAAAGCTGCCTCATAGTATTGGTGAGCTTCCTACCAGCCTGCAACAACTCCACCTAGAAAAAAATCTCATATATGGCTCCATACCTGCTAGTATTGCCAACCTTGTCAACCTGAGTTTCTTGAAGTTGTCTAGTAACCTAATAAATGGATCAATCCCTCCCAGCCTCAGCCATATGAACAGGCTAGAAAGAATTTATTTGTCAAATAATTCACTATCTGGTGAGATTCCTTCAACCCTTGGCGGCATTCAGCATCTGGGACTCCTTGACTTGTCAAGAAACATGCTTTCTGGCCCAATACCAGATAGTTTTGCAAATCTCACCCAGTTAAGAAGGCTTTTACTTTATGACAACCAGCTTTCTGGAACAATCCCACCAAGTCTGGGAAAATGTGTCAATTTGGAGATTTTAGACTTATCTCACAACAACATAACTGGGTTGATTCCGGCAGAAGTTGCAGCCTTGGGTAGCCTGAAACTATACCTGAATTTATCAAACAATAACTTACATGGGTCTTTACCATTAGAACTCAGCAAAATGGACATGGTTCTAGCTATTGATTTATCATTGAATAACCTCTCTGGCAGCATCCCACCACAACTGGAAAGTTGCATAGCACTTGAGTACCTCAACCTCTCTGGTAACTCCTTTGAAGGCCCTCTCCCTTATTCATTAGGCCAATTGCTCTATATTAGAGCACTTGACGTGTCTTTAAATCAGTTGACTGGGGTAATACCACAGTCCATGCAGTTGTCTCCCTCGCTGAAGGAACTTAATTTCTCTTTCAACAAATTCTCAGGGAAAGTGTCAAACAAGGGAGCATTTTCAAACCTTACCATAGACTCTTTCCTGGGAAATCGTGGTCTCTGTGGGCCGTTTAAAGGCATGCAACAATGTCACAAGAAATGTAGTTATCATTTGGTGTTCTTGTTAATTCCCGTGTCACTATTTGGCACCCCTCTCCTATGCATACTTTTTAGGTACCCAATGGTAATGAAATCAAGAGTGAAAAAAGGAATTGCAATTGTTAGCAGAGGTGATTTGGAGAATGTAGAAGAGGCAGCAAATGACGTAAAGTACCCAAGAATTACATATGAACAACTAAAAGAAGCCACCGGAGGCTTCAGTGCTTCAAGCTTAATTGGTTCGGGCCGGTTTGGACAGGTCTACGAAGGAATGCTCCAAGATAATACAAGAATAGCTGTGAAGGTGTTGGACACAACACATGGTGAGATTTCAAGGAGTTTTAGAAGGGAATGTCAAATACTGAAAAAGATAAGGCACAGAAATTTAATAAGGATCATAACAATTTGTTGTAGGCCAGAATTTAATGCTCTTGTTTTTCCCTTGATGCCAAATAATAGCCTTGAGAGGCACCTATATCCAAGCCAAAGATTGAATGTGGTTCAATTACTAAGAATCTGCAGTGATATAGCTGAGGGCATGGCCTATCTGCACCATTACTCTCCAGTGAAAGTAGTGCATTGTGATCTTAAACCAAGCAATATACTCCTTGATGAAGATATGACAGCTCTGATTACTGATTTTGGAATTTCAAGGCTTCTACAAAGTGATGAGAATACATCCACCAGTATCTCATCTTTCAGTTCAACAAATGCTTTGTTATGTGGCTCGGTTGGTTATATTGCTCCCGAATACGGAATGGGAAAAGATGCTTCAACTGAGGGAGATGTTTACAGTTTTGGAGTAGTTGTGTTGGAGATGGTCTCAGGTAGACGCCCCACAGATGTACTCAGCCATGAAGGCTCAAGCTTGTGTGAGTGGCTCAAAAAACTGTACACACAACCACACCACCTTCAAAACTTTGTTCAACAAACACTTCAAAGGTGCTATCCTTTTGGTCTGCCAAACCCTCACAACAAAGTTTGGAGAGATGTTATTCTGGAACTCATTGAGCTGGGGCTAATCTGCACTCAGCACAACCCTTCAACAAGACCAACCATGCACGATATAGCACAAGAGATGGAGAGGTTAAAGGACTACCTCACTAAGTCAACCTCTCATTCAAGTCAATCCCAACGTTAA 2919 0.4135 MMGLFSLAVFLFFFLDTVHSTVLWKENAGIVNGKKSLVSFMSGIVSDPQNALDSWKSPGVHVCDWSGVRCNNASDMIVEVDLSGRSLGGTISPALANLSSLQILDLSGNFLVGQIPKEIGHLVQLRQLSLSGNFLEGHIPSEFGSLHNLDYLDLRSNHLEGEIPPSLFCNGTSLGYVDLSNNSLGGQIPLNKECILKELQFLLLWSNKLSGKVPLALSNSTKLKWLDLGLNMLSGELPSKIVSNWPQLQFLYLSYNNFTSHDDNTNLEPFFASLVNLSHFQELELAGNNLGGKLPHSIGELPTSLQQLHLEKNLIYGSIPASIANLVNLSFLKLSSNLINGSIPPSLSHMNRLERIYLSNNSLSGEIPSTLGGIQHLGLLDLSRNMLSGPIPDSFANLTQLRRLLLYDNQLSGTIPPSLGKCVNLEILDLSHNNITGLIPAEVAALGSLKLYLNLSNNNLHGSLPLELSKMDMVLAIDLSLNNLSGSIPPQLESCIALEYLNLSGNSFEGPLPYSLGQLLYIRALDVSLNQLTGVIPQSMQLSPSLKELNFSFNKFSGKVSNKGAFSNLTIDSFLGNRGLCGPFKGMQQCHKKCSYHLVFLLIPVSLFGTPLLCILFRYPMVMKSRVKKGIAIVSRGDLENVEEAANDVKYPRITYEQLKEATGGFSASSLIGSGRFGQVYEGMLQDNTRIAVKVLDTTHGEISRSFRRECQILKKIRHRNLIRIITICCRPEFNALVFPLMPNNSLERHLYPSQRLNVVQLLRICSDIAEGMAYLHHYSPVKVVHCDLKPSNILLDEDMTALITDFGISRLLQSDENTSTSISSFSSTNALLCGSVGYIAPEYGMGKDASTEGDVYSFGVVVLEMVSGRRPTDVLSHEGSSLCEWLKKLYTQPHHLQNFVQQTLQRCYPFGLPNPHNKVWRDVILELIELGLICTQHNPSTRPTMHDIAQEMERLKDYLTKSTSHSSQSQR* 973
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g02332 972 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 271 367 - -
Phac3g02332 972 Pfam Protein kinase domain 668 951 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac3g02332 972 ProSiteProfiles Protein kinase domain profile. 666 960 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac3g02332 972 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 69 262 - -
Phac3g02332 972 PANTHER RECEPTOR-LIKE PROTEIN 55 316 956 - -
Phac3g02332 972 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 742 966 - -
Phac3g02332 972 Gene3D Ribonuclease Inhibitor 472 583 IPR032675 -
Phac3g02332 972 ProSitePatterns Serine/Threonine protein kinases active-site signature. 784 796 IPR008271 GO:0004672|GO:0006468
Phac3g02332 972 Gene3D Ribonuclease Inhibitor 195 266 IPR032675 -
Phac3g02332 972 ProSiteProfiles Leucine-rich repeat profile. 424 445 IPR001611 GO:0005515
Phac3g02332 972 SMART LRR_typ_2 122 145 IPR003591 -
Phac3g02332 972 SMART LRR_typ_2 277 301 IPR003591 -
Phac3g02332 972 SMART LRR_typ_2 446 471 IPR003591 -
Phac3g02332 972 SMART LRR_typ_2 196 219 IPR003591 -
Phac3g02332 972 SMART LRR_typ_2 398 422 IPR003591 -
Phac3g02332 972 SMART LRR_typ_2 326 350 IPR003591 -
Phac3g02332 972 SMART LRR_typ_2 98 121 IPR003591 -
Phac3g02332 972 SMART LRR_typ_2 146 170 IPR003591 -
Phac3g02332 972 SMART LRR_typ_2 423 445 IPR003591 -
Phac3g02332 972 Pfam Leucine Rich Repeat 100 122 IPR001611 GO:0005515
Phac3g02332 972 Pfam Leucine Rich Repeat 424 442 IPR001611 GO:0005515
Phac3g02332 972 Pfam Leucine Rich Repeat 498 517 IPR001611 GO:0005515
Phac3g02332 972 Gene3D Ribonuclease Inhibitor 367 471 IPR032675 -
Phac3g02332 972 ProSitePatterns Protein kinases ATP-binding region signature. 672 694 IPR017441 GO:0005524
Phac3g02332 972 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 379 594 - -
Phac3g02332 972 ProSiteProfiles Leucine-rich repeat profile. 148 170 IPR001611 GO:0005515
Phac3g02332 972 Gene3D Transferase(Phosphotransferase) domain 1 742 972 - -
Phac3g02332 972 Gene3D Ribonuclease Inhibitor 267 366 IPR032675 -
Phac3g02332 972 Gene3D Ribonuclease Inhibitor 32 194 IPR032675 -
Phac3g02332 972 ProSiteProfiles Leucine-rich repeat profile. 247 268 IPR001611 GO:0005515
Phac3g02332 972 CDD STKc_IRAK 672 956 - -
Phac3g02332 972 Pfam Leucine rich repeat N-terminal domain 35 71 IPR013210 -
Phac3g02332 972 Pfam Leucine rich repeat 352 411 IPR001611 GO:0005515
Phac3g02332 972 SUPERFAMILY Protein kinase-like (PK-like) 648 953 IPR011009 -
Phac3g02332 972 SMART serkin_6 666 960 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac3g02332 972 SUPERFAMILY L domain-like 332 582 - -
Phac3g02332 972 SUPERFAMILY RNI-like 80 364 - -
Phac3g02332 972 Gene3D Phosphorylase Kinase; domain 1 646 740 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g02332 Phac-Chr3 26413081 26416253 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g02332 35 972 Receptor kinase-like Gene Family AT5G20480 33.397 1.67e-160 497
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Phac3g02332 Pkinase 7.7e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g02332 - - gmx:100792446 1642.09