Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g02270 ATGCCTCTTCCCACACACCACCCCCAATTCCAACACCAACCCCAACCCCAACCCCAACCAAAACCTAATCCAAACCTCCTCTCTCTCTTCCTCAAACCCATCATTATGCTCCTTCTCACCTCCCTCTTCTTCCTCTTCATAGGCTTCGCCGCCTTCCTCCTCCTCAACCTCTTTCTCCTTGGCGGCGCCTTCCACCGCCTTCGCTTCCGCCCCTCCGCCGTCACTGCCACCGCTTCCAACGCCCTCCACCCTCGCGAAATCAACAAGCTCCCTCGCTTCCGCCTCTCCCGGGGATCCCACATCCTAGCCGACTTCCCCTGCGTTGTCTGTTTAGACACCTTCCGCAACGGCCAGTGGTGCCGGAAACTCGCCGCCTGCGGTCACGTATTTCACCGCAGGTGCGTCGACACGTGGCTCCTCAAAGTCGCCGCATGCCCCACGTGCCGTACACCCGTGCGGTTCAACGCCGAAACTCCGGTACGTGACCCAACACTAGGTTCTGCTTTTGCCCAATTTCAAACCTGCGAAACTGACTCCAATGCTCTCGCCCTTTTATAG 558 0.586 MPLPTHHPQFQHQPQPQPQPKPNPNLLSLFLKPIIMLLLTSLFFLFIGFAAFLLLNLFLLGGAFHRLRFRPSAVTATASNALHPREINKLPRFRLSRGSHILADFPCVVCLDTFRNGQWCRKLAACGHVFHRRCVDTWLLKVAACPTCRTPVRFNAETPVRDPTLGSAFAQFQTCETDSNALALL* 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g02270 185 MobiDBLite consensus disorder prediction 1 21 - -
Phac3g02270 185 SUPERFAMILY RING/U-box 99 155 - -
Phac3g02270 185 ProSiteProfiles Zinc finger RING-type profile. 107 149 IPR001841 -
Phac3g02270 185 PANTHER E3 UBIQUITIN-PROTEIN LIGASE ATL42 11 163 - -
Phac3g02270 185 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 83 157 IPR013083 -
Phac3g02270 185 SMART ring_2 107 148 IPR001841 -
Phac3g02270 185 Pfam Ring finger domain 107 149 IPR001841 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g02270 21 159 C3H Transcription Factor Family AT2G18670 45.714 2.43e-31 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g02270 - - pvu:PHAVU_003G150700g 311.227