Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g02255 ATGAAGGATAAGTGTTTTTTTTTAATTTTCTATTGGTTTTTAATTGTTTTGCTTGTGCTACTACAGTCACCAACTGTAAATGGATCAAATGCTAGATTGAAGAATGGAGAGATAAAGTTAAGAGTAACGGTACCCATGCATGGTTTCCCCCAATTTGTGAATGTAGTTTGGGACCCTTCTCAACAAAAGTACACCGTTTCTGGATATTGCGTGGATGTTTTGAATGCCGTTGTAACCCGCTTACCCTTCAATGTTTCTCTACATGTTGTACCTTCTGTTGTTGAACCAACCCATGGTTCTGGATTTCACGATGCATATCTAGAACACTTCCTGTCAAAGTATGATGTGGTGGTAGGGGATATAACAATCCTAGCCAACCGTTCAAACCACGTAGATTTCACGGTGCCATATACTGGATCGGGAGTTAAAATGGTAGTACCAGTTCAACATGGGAGGGATCAAAACATGTGGACTTTTGTTAAACCCTTCAGTTGGGATCTTTGGTTGAGCATAATCATCATCTCTACCTTCATAGGGCTTGCCATACTTATCATGGAAAGAAATGTAATCGCGCTGCCTAATCAAGAGGGTTCTCCAAATCAGAAAAAGCTTTGCCCTGCAACCATCTTATTGTTTCCAATCTCACAAGCCATTCTTCCCGAAAAACAAGTAGTGGTAAAACGCTGGTCAAGATTTGTGCTGATGGTTTGGCTTCTATTGGCGTTGGTCCTCATGCAAAGTTACACTGCTAACTTGACTTCTATTTTGACCTTGGATCAACTGCGACCCAGTTTTCAGAACGTTAATGATCTAAGGAGAGGGGGTTATTACGTTGGATACCAGTCTGGGTCTTTTGTTTACGATGTTCTGATTGAACAATTTAAGTTTGACCCGTCCAAACTAAGGCCTTATAGCACCATTGCTGAGTATCGTGATGCTCTAAAGCTTGGAAGCAAAAATGGGGGTGTTGCAGCTATATTCGATGAAGTGCCCTACCTTAAACTCTACCTTAAAGAATACGGATCCAATTACATTTTGGCTGGCCCCGAATATAGAAACGCTGGGTTTGGTTTTGTATTCCCTTTAAACTCCAATCTCACGGATTACTTTTCGAGAGGCATCCTGAATGTGATTGAAAGTGGATTAATGAATGAGATCGAGGAAAAATATTTTGGAAAGAATGATATTGGAGGAGAAGACTCGTCTGCGGAAATATCTTCTGCTCCTCTCAGTCTCAGCTTTCATAGCTTCGCGGGGCTTTTCATTATTGCTGGGATTTCTACTTTGTTAGCGTTGTTGATTTCAGAAAGATTTATTTGGCAAAGACTCATTTTGACGGCTAAAGCATTGACTCAGAGGTATGTCCCCCATTTTTCCAATCCAGTTCAGGATTCAACTCATGAAACAGTGGCTTAA 1416 0.4075 MKDKCFFLIFYWFLIVLLVLLQSPTVNGSNARLKNGEIKLRVTVPMHGFPQFVNVVWDPSQQKYTVSGYCVDVLNAVVTRLPFNVSLHVVPSVVEPTHGSGFHDAYLEHFLSKYDVVVGDITILANRSNHVDFTVPYTGSGVKMVVPVQHGRDQNMWTFVKPFSWDLWLSIIIISTFIGLAILIMERNVIALPNQEGSPNQKKLCPATILLFPISQAILPEKQVVVKRWSRFVLMVWLLLALVLMQSYTANLTSILTLDQLRPSFQNVNDLRRGGYYVGYQSGSFVYDVLIEQFKFDPSKLRPYSTIAEYRDALKLGSKNGGVAAIFDEVPYLKLYLKEYGSNYILAGPEYRNAGFGFVFPLNSNLTDYFSRGILNVIESGLMNEIEEKYFGKNDIGGEDSSAEISSAPLSLSFHSFAGLFIIAGISTLLALLISERFIWQRLILTAKALTQRYVPHFSNPVQDSTHETVA* 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g02255 471 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 35 442 IPR015683 -
Phac3g02255 471 Gene3D - 33 156 - -
Phac3g02255 471 SMART GluR_14 39 393 IPR001320 GO:0015276|GO:0016020
Phac3g02255 471 Pfam Ligand-gated ion channel 394 426 IPR001320 GO:0015276|GO:0016020
Phac3g02255 471 CDD GluR_Plant 39 391 - -
Phac3g02255 471 Pfam Bacterial extracellular solute-binding proteins, family 3 65 393 IPR001638 -
Phac3g02255 471 Gene3D - 157 294 - -
Phac3g02255 471 SUPERFAMILY Periplasmic binding protein-like II 10 394 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g02255 Phac-Chr3 25678760 25680926 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g02255 39 470 Ion Channels AT5G11210 35.160 7.44e-84 273
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g02255 K05387 - gmx:100807817 617.461