Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g02254 ATGAAGGGTAAGTGCCTTTTATCTATTTTCTATTGTTTTTTAATTATTTTGCTTGTGCTACTACAGGCACCAACTGGAAATGGATCAAATGCTAGATTGAAGAATGGAGAGATAAAGTTAAGAGCAAGGGTACTCACGGGATATGGTTTCCCCCAATTTATAAATGCAGTTTGGGACCCTTCTCAACAAAAGTACACCGGATCTGGATATTGCATGGATGTTTTCAATGCCGTTGTAACCTACTTACCCTTCAATGTTTCTCTAGACGTTGTACTTTTTGTTGATGAATCAAGCCATGGTTCTAGATTTGACGATGCACTTCCAGAATTCATCTCGTCAAAGAATGATGTTGGGATAGCTGATGTAACAATCCTAGCCAACCGTTCAAATTATGTAGATTTCACAGTGCCATATAGTGGATCGGGAGTTAAAATGGTAGTACCAGTTAAGCATGGGAGGGATCAAAACATGTGGACTTTTGTTAAACCCTTCAGTTGGGATCTTTGGTTGAGCATAATCATCATCTCTACCTTCATAGGGCTTGCCATACTCATCATGGAAAGAAATGTAGAGGAGTTGCCTAATCAAGAGGGTTCGCCAAATCAAACAATGCTTGGCCCTATAACCATCTTGTGGTTTCCAATTTCACAAGCCATTCTCCCTCAAAGAGATGTAGTGGTCAAGAGCTACTCAAGATTTGTGCTGATGGTTTGGCTTCTATTGGCGTTCGTTCTCATGCAGAGTTACACTGCCAACCTGACTTCTATATTGACCTTGGATCAACTGCGACCCAGTTTTCAGAACGTTAATGATCTAAGGAGAGGGGGTTATTACGTTGGATACCAGTCTGGGTCTTTTGTTTACGATGTTCTGATTGACCAATTTAAGTTTGACCCGTCCAAACTAAGGCCATATAGCACCATTGCTGAGTATCATGATGCTCTAAAGCTTGGAAGCAAAAATGGGGGTGTTGCAGCTATATTCGATGAAGTGCCCTACCTTAAACTCTACATTCAAGAATACGGATCCAGTTACATTATGGCTGGCCCCAAATATAGAAATGCTGGGTTTGGTTTTGTATTCCCTTTAAACTCCAATCTCACGGCTTACTTTTCGAGAGGCATCCTGGATGTGTTTGATAGTGGATTAATGAATGAGATTGAGGAAAAATATTTTGGAAAGAATGATATTGGAGGAGAAGACTCGTCTGCGGAAATATCTTCTGCACCTCTCAGTCTCAGCTTTCATAGCTTCGCGGGACTTTTCATTATTGCTGGGATTTCTACTTTATTAGCGTTGGCAGCAACTGGAAATGGAACAAATGCTAGATTGAAGAATGGAGAGATAAAGTTAAGAGTAAGGGTACCCATGAGAGATGGTTTCCCCCAATTTGTGAATGTAGTTTGGGACCCTTCCCAACAAAAGTACACCGTTTCTGGATATTGCATAGATGTTTTCTATGCCGTTGTAACCCGCTTACCCTTCAATGTTTCTCTACATATTGTACCTTCTGCTGTTGAATCAAACCAGGTTTCTAGAAGACACCATGCAATTCTAAAACAAATGTCGACAGAGAGCGAAGTTGTGGTAGGAGATTTAACGATCCGGGCCAACCGTTCAAACCACGTAGATTTCACGGTGCCATATACTGGATCGGGAGTTAAAATGGTAGTACCAGTTCAACATGGGAGGGATCAAAACATGTGGACTTTTGTCAAACCCTTCAGTTGGGATCTTTGGTTGAGCATAATCATCATCTCTACCTTCATAGGGCTTGCCATACTCATCATGGAAAGAAATGTAAGCGCGCTGCCCAATCAAGAAGAGGGTTCTCCAAATAAAAAAAAGCTTTGCCCTGCAACCATCTTATTGTTTCCAATCTCACAAGCCATTCTTCCCGAAAAACAAGTAGTGGTAAAACGCTGGTCAAGATTTGTGCTGATGGTTTGGCTTCTATTGGCGTTGGTCCTCATGCAAAGTTACACAGCCAACTTGACTTCTATATTGACCTTGGATCAACTGCGACCCAGTTTTCAGAACGTTAATGATCTAAGGAGAGGGGGTTATTACGTTGGATACCAGTCTGGGTCTTTTGTTTACGATGTTCTGATTGACCAATTTAAGTTTGACCCATCCAAACTAAGGCCATATAGCAACATTGCAGAGTATCATGAAGCTCTTAAGCTTGGAAGCAAAAATGGGGGTGTTGCAGCTATATTCGATGAAGTGCCCTACCTTAAACTCTACCTTAAAGAATACGGATCCAATTACATTTTGGCTGGCCCCGAATATAGAAATGCTGGGTTTGGTTTTTAA 2316 0.4128 MKGKCLLSIFYCFLIILLVLLQAPTGNGSNARLKNGEIKLRARVLTGYGFPQFINAVWDPSQQKYTGSGYCMDVFNAVVTYLPFNVSLDVVLFVDESSHGSRFDDALPEFISSKNDVGIADVTILANRSNYVDFTVPYSGSGVKMVVPVKHGRDQNMWTFVKPFSWDLWLSIIIISTFIGLAILIMERNVEELPNQEGSPNQTMLGPITILWFPISQAILPQRDVVVKSYSRFVLMVWLLLAFVLMQSYTANLTSILTLDQLRPSFQNVNDLRRGGYYVGYQSGSFVYDVLIDQFKFDPSKLRPYSTIAEYHDALKLGSKNGGVAAIFDEVPYLKLYIQEYGSSYIMAGPKYRNAGFGFVFPLNSNLTAYFSRGILDVFDSGLMNEIEEKYFGKNDIGGEDSSAEISSAPLSLSFHSFAGLFIIAGISTLLALAATGNGTNARLKNGEIKLRVRVPMRDGFPQFVNVVWDPSQQKYTVSGYCIDVFYAVVTRLPFNVSLHIVPSAVESNQVSRRHHAILKQMSTESEVVVGDLTIRANRSNHVDFTVPYTGSGVKMVVPVQHGRDQNMWTFVKPFSWDLWLSIIIISTFIGLAILIMERNVSALPNQEEGSPNKKKLCPATILLFPISQAILPEKQVVVKRWSRFVLMVWLLLALVLMQSYTANLTSILTLDQLRPSFQNVNDLRRGGYYVGYQSGSFVYDVLIDQFKFDPSKLRPYSNIAEYHEALKLGSKNGGVAAIFDEVPYLKLYLKEYGSNYILAGPEYRNAGFGF* 772
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g02254 771 Pfam Bacterial extracellular solute-binding proteins, family 3 477 760 IPR001638 -
Phac3g02254 771 Gene3D - 35 157 - -
Phac3g02254 771 Gene3D - 445 568 - -
Phac3g02254 771 SMART GluR_14 39 394 IPR001320 GO:0015276|GO:0016020
Phac3g02254 771 SUPERFAMILY Periplasmic binding protein-like II 422 771 - -
Phac3g02254 771 Pfam Ligand-gated ion channel 395 427 IPR001320 GO:0015276|GO:0016020
Phac3g02254 771 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 49 435 IPR015683 -
Phac3g02254 771 SUPERFAMILY Periplasmic binding protein-like II 9 395 - -
Phac3g02254 771 Pfam Ligand-gated ion channel 576 686 IPR001320 GO:0015276|GO:0016020
Phac3g02254 771 Gene3D - 569 705 - -
Phac3g02254 771 Gene3D - 158 293 - -
Phac3g02254 771 Pfam Bacterial extracellular solute-binding proteins, family 3 68 394 IPR001638 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g02254 Phac-Chr3 25632586 25643709 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g02254 440 771 Ion Channels AT5G11210 36.036 2.36e-62 223
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g02254 K05387 - gmx:100811144 571.622