Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g02253 ATGTATAAGTGCTGCTTATCATCCCTTTTCTCTGGGTTTTTGATTTTTTTGTTTGTGCTTCAACAAACACCAACGGGGAATGCGTCAAATGAAACATCAAAGTATGAAGAGATGAAGTTGAGAGTAGGGGTGCCCATGAAAGATGGTTTCCGACAATTTGTGGATGTAGTTAACTACGCTACTGGTCAAGAAAAATACAACATAACTGGATATTGCATGGATGTTTTCAATGCCGTCTTAACCCGTTTGCGCTTCAATGTTTCTCTAAGCATTGAACCTTATCCTGTTGACACAAGTGAGGGTTCTGGGTACGATGATCTTCTAAAACAAATCCCGTCAAAGTATGATGTGGTGGTAGGGGATATAACAATCCTAGCCAGCCGTTCAAACTATGTAGATTTCACGGTGCCATATACTGCATCGGGAGTTAAAATGGTAGTACCAGTTCAACATGGGAGGGATCAAAACATGTGGACTTTTGTCAAACCCTTCAGTTGGGATCTTTGGTTGAGCATAATCATCATCTCTACCTTCATAGGGCTTGCCATACTTATCATGGAAAGAAATGTAAGCGCACTGCCTAACCAAGAGGGTTCTCCAAATCAGAAAAAGCTTTGCCCTGCAACCATCTTATGGTTTCCAATCTCACAAGCCATTCTTCCTGAAAGACAAGTAGTGGTAAAAAGCTGCTCTAGATTTGTGCTGATGGTTTGGCTTCTATTGGCGTTCGTCCTCATGCAAAGTTATACTGCTAACTTGACTTCTATATTGACCTTGGATCAACTGCAACCCAGCTTTCTCAACGCAAATGACTTAAGAAAAGGGGGCTATTTCGTTGGATACCAAACGGGGTCTTTCGTTCACGATGTGTTGGTTAAGCAATTTAAGTTTGACCCATCAAAACTGAAGCCATATAGCAGCAGTTCCGAGTATCATGAAGCTCTAAAGCTTGGAAGCGAAAATGGGGGTGTTGCAGCTATATTCGATGAAGTGCCCTACCTTAAACTCTACATTCAAGAATACGGATCCAATTACATTATGGCTGGCCCCAAATATAGAAATGCTGGGTTTGGTTTTGTAAGTCTCTTCTCTCCAATTCTAATTCTTGAACAAGCTTGA 1119 0.4129 MYKCCLSSLFSGFLIFLFVLQQTPTGNASNETSKYEEMKLRVGVPMKDGFRQFVDVVNYATGQEKYNITGYCMDVFNAVLTRLRFNVSLSIEPYPVDTSEGSGYDDLLKQIPSKYDVVVGDITILASRSNYVDFTVPYTASGVKMVVPVQHGRDQNMWTFVKPFSWDLWLSIIIISTFIGLAILIMERNVSALPNQEGSPNQKKLCPATILWFPISQAILPERQVVVKSCSRFVLMVWLLLAFVLMQSYTANLTSILTLDQLQPSFLNANDLRKGGYFVGYQTGSFVHDVLVKQFKFDPSKLKPYSSSSEYHEALKLGSENGGVAAIFDEVPYLKLYIQEYGSNYIMAGPKYRNAGFGFVSLFSPILILEQA* 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g02253 372 Gene3D - 32 157 - -
Phac3g02253 372 SUPERFAMILY Periplasmic binding protein-like II 16 360 - -
Phac3g02253 372 Pfam Ligand-gated ion channel 165 275 IPR001320 GO:0015276|GO:0016020
Phac3g02253 372 SMART GluR_14 39 364 IPR001320 GO:0015276|GO:0016020
Phac3g02253 372 Pfam Bacterial extracellular solute-binding proteins, family 3 65 354 IPR001638 -
Phac3g02253 372 Gene3D - 158 296 - -
Phac3g02253 372 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 36 360 IPR015683 -
Phac3g02253 372 FunFam Glutamate receptor 2.7 35 156 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g02253 Phac-Chr3 25622021 25624240 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g02253 40 360 Ion Channels AT2G29120 41.925 2.02e-71 238
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g02253 K05387 - gmx:100807817 532.332