Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g02206 ATGAATTTCCATCCCAATACTTCTCTTCACCTAAGACAACCAGATGAGATCAATCACCTTAATCTAGATCTTCTTCTTGAGCCATCTTCTTCTTCATCATCTTCTCCTTCACCTATAAGTCCCATTGAGCCGCGGATATTCTCATGCAACTATTGCCAGAGAAAGTTCTATAGCTCTCAAGCGCTAGGGGGTCACCAAAATGCTCACAAGCTTGAGAGGACACTGGCCAAGAAGAGCAGGGAAATGAGTTCAACCATGCAATCTTACGGAACACAGGAGCAAAGATCAAACTTCAGCCCTTCACACCATCTTGGTCGTGCTCTTGGGGTTAACGTTGTGGATGACCAAGGACAAAGTTATGTGAGGCTTGGCGGAAGAAAAGAATACAGTTTTGGACCCAAGGAAGGGATGGCTTCCTGGTCAAGGGGTTATACTTCTGAGCATGTTCAGGAGGATATTGGCCAACTTGACTTGTCGTTGAGGCTTTGA 489 0.454 MNFHPNTSLHLRQPDEINHLNLDLLLEPSSSSSSSPSPISPIEPRIFSCNYCQRKFYSSQALGGHQNAHKLERTLAKKSREMSSTMQSYGTQEQRSNFSPSHHLGRALGVNVVDDQGQSYVRLGGRKEYSFGPKEGMASWSRGYTSEHVQEDIGQLDLSLRL* 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g02206 162 SUPERFAMILY beta-beta-alpha zinc fingers 44 74 IPR036236 -
Phac3g02206 162 ProSitePatterns Zinc finger C2H2 type domain signature. 49 69 IPR013087 -
Phac3g02206 162 ProSiteProfiles Zinc finger C2H2 type domain profile. 47 74 IPR013087 -
Phac3g02206 162 Gene3D Classic Zinc Finger 38 103 - -
Phac3g02206 162 PANTHER C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN 14 109 IPR044246 GO:0009788
Phac3g02206 162 FunFam Zinc finger protein 2 26 94 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g02206 Phac-Chr3 25240815 25242142 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g02206 1 162 C2H2 Transcription Factor Family AT5G57520 47.977 7.21e-30 104
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Phac3g02206 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g02206 - - vra:106768043 288.115
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac3g02206 3 25240815 25242142 Phac3g02206 3 25240815 25242142 ECH