Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g02205 ATGCCACCAACAACACCACCACCAACAATGGCACCTTCTCCACAAGATATCATCTTCAGATCCCCACTTCCCGATATTCCCATTCCCACGCACCTTCCACTACACTCTTACTGCTTCCAAAATCTCTCCCAATTCCAACACCGAACATGCCTCATCGACGGCGAGACCGGCGACACCCTCACCTACGCCGAAGTCGACCTTGCCGCCCGCCGCATCGCCGCCGGCCTCCACAACATCGGCATCCGCCAGGGGGACGTCATCATGCTCGTCCTCCGCAACTGCCCCCAATTCGCCCTCGCCTTCCTCGGCGCCTCCCACCGCGGCGCCGTCATCACCACTGCCAACCCCTTCTACACGCCGCTGGAGCTTGCCAAGCAAGCAGCCGCCACCAAAACCAGGCTGGTGATAACGCAATCCGCGTACGTCGATAAAATCAAGAGCTTCGCGGACAACAATGACGTGATGGTCATGTGCATCGACTCTGAGAACGACGGCGTTTTACATTTCTCCACGCTAACGAACGCCGACGAAACGGAAGCCCCCGCCGTTAAGATTAGCCCAGACGACGTCGTGGCGCTTCCGTTTTCTTCTGGCACTTCGGGGCTCCCCAAGGGCGTTATGTTATCGCATAAAAACTTGGTCACCACTATAGCGCAGTTAGTTGACGGCGAAAACGCGCACCAGTACACTCACAGCGAGGATGTGCTCCTCTGCGTGCTTCCTATGTTTCATATCTATGCGCTCAATTCAATTTTACTCTGCGGGATTCGGTCCGGTGCGGCCGTTCTCATTGTGCAGAAGTTTGAGATGACGAGTCTGTTGGAGCTGATCCAGAAGTACAGGGTGACCGTTGCGTCCTTTGTGCCACCCATCGTTTTGGCGTTGGTTAAGAGCGGAGAGGCCCATCGATACGACCTCTCCTCTGTTCGCGCCGTCGTCACTGGCGCCGCACCCTTGGGAAAGGAACTACAAGAAGCTGTGGAATCTAGGCTACCCCACGCCACTTTTGGACAGGGATATGGGATGACAGAAGCAGGACCACTTGCGATTAGCATGGCATTTGCAAAAGAACCCTCAAAGATAAAACCTGGTGCATGCGGCACCGTTGTGAGAAACGCTGAGATGAAAATCGTGGACACAGAAACGGGTGTTTCCCTTCCGAAAAACGAAACCGGTGAAATTTGCATAAGAGGCACAAAGGTTATGAAAGGATATCTAAACGACCCAGAGGCTACAGAGAGAACTATAGACAAAGATGGATGGCTCCACACAGGAGATATTGGTTACATCGACGATGATGACGAACTCTTCATTGTTGATAGGTTAAAGGAACTGATCAAATACAAAGGGTTCCAAGTAGCTCCTGCTGAGCTCGAAGCATTGTTAATTGCCCATCCAAACATCTCTGAAGCTGCCGTTGTACCCATGAAAGATGAAGCTGCCGGAGAAATTCCTGTTGCATTTGTCGTAAGATCAAAAGGTTCTGAGATCACGGAAGATGAAATAAAGCAATACATTTCACAGCAGGTGGTATTTTACAAGAGAATCGGTAGGGTTTTCTTCACAGACTCTATTCCTAAAGCAGCCTCAGGCAAAATACTGAGGAAGGTACTAACTGCAAGACTTAACGAAGGTCTGGTGGTGGCCAATTAG 1653 0.5154 MPPTTPPPTMAPSPQDIIFRSPLPDIPIPTHLPLHSYCFQNLSQFQHRTCLIDGETGDTLTYAEVDLAARRIAAGLHNIGIRQGDVIMLVLRNCPQFALAFLGASHRGAVITTANPFYTPLELAKQAAATKTRLVITQSAYVDKIKSFADNNDVMVMCIDSENDGVLHFSTLTNADETEAPAVKISPDDVVALPFSSGTSGLPKGVMLSHKNLVTTIAQLVDGENAHQYTHSEDVLLCVLPMFHIYALNSILLCGIRSGAAVLIVQKFEMTSLLELIQKYRVTVASFVPPIVLALVKSGEAHRYDLSSVRAVVTGAAPLGKELQEAVESRLPHATFGQGYGMTEAGPLAISMAFAKEPSKIKPGACGTVVRNAEMKIVDTETGVSLPKNETGEICIRGTKVMKGYLNDPEATERTIDKDGWLHTGDIGYIDDDDELFIVDRLKELIKYKGFQVAPAELEALLIAHPNISEAAVVPMKDEAAGEIPVAFVVRSKGSEITEDEIKQYISQQVVFYKRIGRVFFTDSIPKAASGKILRKVLTARLNEGLVVAN* 551
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g02205 550 FunFam Long-chain-fatty-acid--CoA ligase FadD 20 443 - -
Phac3g02205 550 Pfam AMP-binding enzyme 41 448 IPR000873 -
Phac3g02205 550 Pfam AMP-binding enzyme C-terminal domain 457 532 IPR025110 -
Phac3g02205 550 Gene3D - 443 546 IPR045851 -
Phac3g02205 550 Gene3D - 13 442 IPR042099 -
Phac3g02205 550 SUPERFAMILY Acetyl-CoA synthetase-like 15 544 - -
Phac3g02205 550 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 14 539 - -
Phac3g02205 550 ProSitePatterns Putative AMP-binding domain signature. 193 204 IPR020845 -
Phac3g02205 550 FunFam 4-coumarate--CoA ligase 2 444 545 - -
Phac3g02205 550 CDD 4CL 28 538 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g02205 Phac-Chr3 25214447 25219442 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g02205 16 510 Monolignol Biosynthesis Gene Families AT1G51680 65.545 0.0 667
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g02205 K01904 - gmx:548034 974.156