Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g02197 ATGGATACTGATGAGGAGTGCTCATTTGTTCTTGAATTACCTGAAACGGATCCTTTCTTTGACAAAAAGAAGAAATTACTACAAAGTAAGGGTTTTAGTCCCAAAGAACGGATATACCTCAGGAGCTCTTCAAAACCTGGCTGGATGAATGCTACTGTGGAGGTGTTACTTCAGATTGCACGGATCATACAATTAAATGAGGTGGAACTTTATTTTGCTGAAGATGATGTATGCATGTCAACGGAATTTTACAGTCCCAGGAATGAGTTGGAGGCTCTCAATTCAATTGTTTTGCTCATTGACATATCACTTTCTAGTTGTTCAGATCTCCATACAAATATCCTGCAAGGGTTACGCCAAACAATTCTTGATTTAATTTCTGATTTGGGGGACAAAAACAGTGTGAAGGGAGTAGTTGAAAAAGACCACAGTTGTAACCAAGAAGAATGCCTGATAGAATGGGGTGAAAGCAATGGTGTAAAGACACAGTTAAAAATAGCTTATATTGAAGGAGCTGGTCGAGGTGCAATAGCAAGGAAAGATCTAAAAGTTGGAGACATTGCTTTGGAAATTCCTGTGTCCATTATCATTTCTGAGGAGCTTATACAGGAAACTGAAATGTATGGTGTCTTAAAAGAAATTGACGGCATATCATCTGAGACAATATTGCTATTATGGAGTATGAAAGAAAAGTACAATAGTGATTCAAAATTCAAAATTTATTTTGACACACTCCCAGAAAAATTTAATACAGGTTTGAGTTTCAGCATTCAAGCAATTACAGTGTTAGATGGAACCTTGCTGTTGGAAGAGATAATGCAAGCACGGCAGCACCTGCATGCTCAATATGATGAGTTGTTCCCTGCTCTATGCAATACTTTTCCTGATATATTTCCACCAGAGCTGTACACATGGGAGAAATTTTTATGGGCTTGTGAACTTTGGTACTCTAATAGCATGAAGATAAAGTATTCCGATGGAAAGCTAAAAACATGCTTGATCCCTATTGCTGGCTTTCTTAATCATTCACTGTGCCCACATGTTATGCACTATGGCCAAGTGGATCCTGCAAAAAATTCACTGAAATTTTGTCTGTCAAGACCATGCAGATCTGGAGAAGAATGCTGCTTAAGCTACGGCAACTTCTCCAGCTCTCATCTAATTACCTTTTATGGTTTTTTACCACAAGGAGACAACCCGTATGATGTTATTCCGTTAGACATTGACGGCACCGACGTTGATTCTAATGAGGATATACCCAGGTCCAACTGGACGAGTCACATGGTGCGTGGTACCTGGCTCTCCAGGGATCACAAGATATTCTATTATGGTCTTCCCTCTCCATTATTGGACCATCTTCGGAGATGTCGAAGTCCCATGCTGCGAACAAAGACCTTTTTGCAAGAAAGCTTGGAAAATGAGCTCGAAGTTCTTGAAAATCTGAAAAATATCTTCGATGACATGATGGGAAATATGGGCGAGATCGATCTTGATGACAGAGAAAACTGCAATTGGGATGAAAAATTGGCTATGGATTTTAAAAATACACAAAGACGAATTGCGCATTCTGTTTCAACCTCGTGCCTCGCTGGTATGGATATGTTAAAGAACGAGCTATCCAAGTGCATGGCTGAGGACATCCGAGGCTAA 1650 0.3976 MDTDEECSFVLELPETDPFFDKKKKLLQSKGFSPKERIYLRSSSKPGWMNATVEVLLQIARIIQLNEVELYFAEDDVCMSTEFYSPRNELEALNSIVLLIDISLSSCSDLHTNILQGLRQTILDLISDLGDKNSVKGVVEKDHSCNQEECLIEWGESNGVKTQLKIAYIEGAGRGAIARKDLKVGDIALEIPVSIIISEELIQETEMYGVLKEIDGISSETILLLWSMKEKYNSDSKFKIYFDTLPEKFNTGLSFSIQAITVLDGTLLLEEIMQARQHLHAQYDELFPALCNTFPDIFPPELYTWEKFLWACELWYSNSMKIKYSDGKLKTCLIPIAGFLNHSLCPHVMHYGQVDPAKNSLKFCLSRPCRSGEECCLSYGNFSSSHLITFYGFLPQGDNPYDVIPLDIDGTDVDSNEDIPRSNWTSHMVRGTWLSRDHKIFYYGLPSPLLDHLRRCRSPMLRTKTFLQESLENELEVLENLKNIFDDMMGNMGEIDLDDRENCNWDEKLAMDFKNTQRRIAHSVSTSCLAGMDMLKNELSKCMAEDIRG* 550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g02197 549 Pfam Rubisco LSMT substrate-binding 15 105 IPR015353 -
Phac3g02197 549 PANTHER UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE 136 484 - -
Phac3g02197 549 Pfam SET domain 173 380 IPR001214 GO:0005515
Phac3g02197 549 SUPERFAMILY SET domain 149 401 IPR046341 -
Phac3g02197 549 FunFam SET domain-containing protein 4 141 - -
Phac3g02197 549 ProSiteProfiles SET domain profile. 162 380 IPR001214 GO:0005515
Phac3g02197 549 Gene3D set domain protein methyltransferase, domain 1 145 394 - -
Phac3g02197 549 CDD SET_LSMT 164 394 - -
Phac3g02197 549 Coils Coil 464 488 - -
Phac3g02197 549 Gene3D - 2 114 IPR036464 -
Phac3g02197 549 FunFam Transcription factor, E2F and DP-related 146 394 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Phac3g02197 SET 3.6e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g02197 K19199 - gmx:100778605 1000.73