Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g02177 ATGTATTCGAGTTCGAGTCAGTTCGACGGCAACGCAGCCTTCTCTGGCGGCGGATTTATGCCTTCTCAGGCTACTCAGGGCACTGATCCTTCACTGGGTTTCTCCAAGAATCGCGATGCTCAGTCCTTGCTTCCTCTAACAGTTAAGCAAATATACGATGCGTTTCAATCAAGCGATGATAAAGCCAATTTGATTGTTGACGGTGTGGACGTTAATAATGTTACTCTTATAGGAAGAGTCTGCAACATAGCTGGACGAGTTACTGATGTTACTTTTGTGCTTGATGATGGTACTGGGAAGATTGAGTGTAATAAATGGTTTCAGGAAGCTGCTGATTCAAATGAAGCAGAGTCTATCTTGGACGGAATGTATGCGAGGCTCCATGGACATTTGAAAAACTTTCAGGGTAAAAGGACCTTGAATGTTTTCTATTTCAGGCCTGTGACTGACTTTAACGAGGTTGCTAGTCATTTCATAGATTGCATATATGTGCATCTCTACAATTCCAGGATTCGGAGTAGTGTCCCTAATCAGCAACATGTTATGAATTCTACGCCAATTACTCCCACAATGGGTTATCAAGCTAAAGTTGTTCCACCAACAAATCAGAAGAGTGCTGAAACTATGGTCTTAGATTTTCTGCATCTTCCCGCCAACAGGTCAAGGAATGAGGGAGTCCGTCGTGATCTTATTGCACAGCATCTTGAAATTTCTTTGGATAAGCTCATGCTGGCTATTAAAAACCTTATCGATGAAGGTGCCGTTTATGAAACTATTGCTGATCACTATAAGTCAATCATCAATGGTTGA 810 0.4198 MYSSSSQFDGNAAFSGGGFMPSQATQGTDPSLGFSKNRDAQSLLPLTVKQIYDAFQSSDDKANLIVDGVDVNNVTLIGRVCNIAGRVTDVTFVLDDGTGKIECNKWFQEAADSNEAESILDGMYARLHGHLKNFQGKRTLNVFYFRPVTDFNEVASHFIDCIYVHLYNSRIRSSVPNQQHVMNSTPITPTMGYQAKVVPPTNQKSAETMVLDFLHLPANRSRNEGVRRDLIAQHLEISLDKLMLAIKNLIDEGAVYETIADHYKSIING* 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g02177 269 FunFam replication protein A 32 kDa subunit A-like 36 170 - -
Phac3g02177 269 PANTHER REPLICATION PROTEIN A-RELATED 7 266 IPR040260 -
Phac3g02177 269 PIRSF RPA32 2 267 IPR014646 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
Phac3g02177 269 Pfam Replication protein A C terminal 165 261 IPR014892 -
Phac3g02177 269 SUPERFAMILY "Winged helix" DNA-binding domain 203 266 IPR036390 -
Phac3g02177 269 Coils Coil 232 252 - -
Phac3g02177 269 Gene3D - 35 170 IPR012340 -
Phac3g02177 269 Gene3D - 201 267 IPR036388 -
Phac3g02177 269 Pfam OB-fold nucleic acid binding domain 74 142 IPR004365 GO:0003676
Phac3g02177 269 CDD RPA2_DBD_D 73 166 - -
Phac3g02177 269 SUPERFAMILY Nucleic acid-binding proteins 43 169 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g02177 Phac-Chr3 24912706 24919368 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g02177 4 266 Core DNA Replication Machinery Family AT2G24490 43.636 1.28e-75 229
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g02177 K10739 - gmx:100782819 437.958