Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g02173 ATGGAGGAAAAAAGAGAACTTGTATATGAAGTATCTAAGTGGTCTCATGGTGCATCTGAGATGCTGCAGTCATGGAGCCGTCAAGAGATTTTGCAAATATTGTGTGCAGAAATGGGAAAAGAGAGAAAGTATACTGGGCTGACAAAGTTGAAAATTATAGAAAATCTTCTAAAAATTGTTTCTGAAAAGAAATCAGGGGGGCATGAAACTGCGACAGACCCTGAACCACATTCCTCTCCTGCATCTGGTCAGAAACCTGCTAAAAGGCAGAGAAAATCTGAGAATCCTTCTCAGTTACCTGTTCCTGTGACCAGCATTTCAGTCAATAATAGTAGTGATTCTGTTAATACTACATACTGCAAAAACTCAGCCTGCAAAGCTACCCTGAATCAAGCAGATGCATTTTGTAAAAGATGTTCATGCTGCATTTGTCATCAATATGATGACAACAAAGACCCTAGCCTGTGGTTAATATGTAGTTCTGAGAATCCATTTCCCGGTGTTTCTTGTGGCTTGTCATGCCACCTTGAGTGTGCTCTAAAACATGATGGTTCTGGAATTGGCAAAGATGGGGAGCGTCCCAAGCTTGATGGAGGCTTCTACTGTGTTGCTTGTGGGAAAGTAAATGATTTACTTGGATGCTGGAGAAAACAACTGATGGTAGCAAAGGATACTAGACGTGTAGATATACTCTGTTATCGTGTCTCCTTAAGCCAGAGGCTTTTACAAGGAACTGAAAAGTATGACGAACTTTATAAAATTGTTGATGAAGCAGTGAAGAAACTTGAACCTGAAGTGGGCCCACTCACTGGCTCACCGGTGAAGATTGGTAGGGGAATTGTGAACAGGCTTTCTTCAGGACCTGAGGTTCAGAAACAATGTAGTTTTGCTCTTGAATCGCTTGATTCACTGCTTTCGAAAAGGATCTCGCCATCATCACCCAATCCAACAACTCAAGATGCACATTTTCTGGCTCCAAATATGGTGAGGTTTGAAGATGTCACTGCCACATCCCTCACTATTATTCTGGGTACCAAAGAACCCTCTGGTGAAAATATCGCGGCTTACACCATGTGGTATCGCAAAGCTGATGAAGTAGACTATCCCATGGACCCGACATGCACCTCGCTTGTACCAAGTAGAAGGTTCAGTGTCAGGGGTCTACTTCCAGGTACAGAATACAGTTTCAAAGTTGTTTCAAATGATTCGAGGGAGTCAGGTGTGTGTGAAGTTCAAATCACAACAGAGCTTGGCGAGGATGAAGTCCCTAATTGCTCAGCGACAGAGAGAAGTCAAAGCCCAGTAACCAACTGTAGCAGCCTTTCCAATCCGTCATCAGTGGAAGATGAAACTAATAACTGCAATCCATATAGTGACCTGACTGATAACCGAGGAGGTCATTATCCTCCTTATCACAAGGAAAGCGACCAGCTTGCTTCTGGAAATTTATCAAATGATGCTGTTAACTGTTCCAATATAGATGTTGTGAGTCTTCCTCCTGATGCAGATTCTTTGTCAGACAAGCAGCATGCTGTAGGAATGACTGCCTCCATACCTAGTACGGACGTGCTAAAGCTGGAAGACAAGCACTCGCCAGAGGAACAAGTGACTGAGGACATGAGCATTGACGATGGGTTGAATTCTCCAGTTCTGACGGGTAGGGAATGTGTGCCGTTGGTAGGTAGCTCGGAAGGAGGCTTGCCTAATACTCCCTGCAAGTTGGAAACACTTAAGGATGGAGCAGGAAGGATTGGAAGATCCAAGTCCAGTGCCAAAGATCAAGAAAATGGATCCGGGAAAAGGGAGGGCCCCCAGGATGGAAGCACATCCAAGAAGAGAAGCGGAGAAAGGCAAGATGAGGGCCGTGTCGCTAATGGCTTTTCGGAGCGTGATTTTGAGTATTATGTGAAGGTGATTAGGTGGTTAGAATGTGAAGGGCACATAGAGAAGAACTTCAGGCAGAAATTTCTGACTTGGTACAGCTTAAGAGCCACCCCTCAAGAAGTAAGGATTGTGAAAATATACATTGATACATTTCTTGAAGATCCAGCATCTCTTGCAGAGCAACTTGTGGACACCTTCTCAGAATGTATATCCAGCAAGAGAATATCAGTGGTGCCAGCGGGGTTCTGCATGAAGCTTTGGCATTGA 2151 0.4412 MEEKRELVYEVSKWSHGASEMLQSWSRQEILQILCAEMGKERKYTGLTKLKIIENLLKIVSEKKSGGHETATDPEPHSSPASGQKPAKRQRKSENPSQLPVPVTSISVNNSSDSVNTTYCKNSACKATLNQADAFCKRCSCCICHQYDDNKDPSLWLICSSENPFPGVSCGLSCHLECALKHDGSGIGKDGERPKLDGGFYCVACGKVNDLLGCWRKQLMVAKDTRRVDILCYRVSLSQRLLQGTEKYDELYKIVDEAVKKLEPEVGPLTGSPVKIGRGIVNRLSSGPEVQKQCSFALESLDSLLSKRISPSSPNPTTQDAHFLAPNMVRFEDVTATSLTIILGTKEPSGENIAAYTMWYRKADEVDYPMDPTCTSLVPSRRFSVRGLLPGTEYSFKVVSNDSRESGVCEVQITTELGEDEVPNCSATERSQSPVTNCSSLSNPSSVEDETNNCNPYSDLTDNRGGHYPPYHKESDQLASGNLSNDAVNCSNIDVVSLPPDADSLSDKQHAVGMTASIPSTDVLKLEDKHSPEEQVTEDMSIDDGLNSPVLTGRECVPLVGSSEGGLPNTPCKLETLKDGAGRIGRSKSSAKDQENGSGKREGPQDGSTSKKRSGERQDEGRVANGFSERDFEYYVKVIRWLECEGHIEKNFRQKFLTWYSLRATPQEVRIVKIYIDTFLEDPASLAEQLVDTFSECISSKRISVVPAGFCMKLWH* 717
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g02173 716 CDD PHD_VIN3_plant 140 205 - -
Phac3g02173 716 PANTHER VIN3-LIKE PROTEIN 2-RELATED 1 716 IPR044514 GO:0010048|GO:0040029
Phac3g02173 716 MobiDBLite consensus disorder prediction 528 549 - -
Phac3g02173 716 Pfam PHD - plant homeodomain finger protein 120 239 IPR032881 -
Phac3g02173 716 MobiDBLite consensus disorder prediction 561 623 - -
Phac3g02173 716 CDD FN3 325 415 IPR003961 GO:0005515
Phac3g02173 716 MobiDBLite consensus disorder prediction 420 460 - -
Phac3g02173 716 Gene3D Immunoglobulins 323 421 IPR013783 -
Phac3g02173 716 ProSiteProfiles Fibronectin type-III domain profile. 325 420 IPR003961 GO:0005515
Phac3g02173 716 MobiDBLite consensus disorder prediction 93 108 - -
Phac3g02173 716 MobiDBLite consensus disorder prediction 64 108 - -
Phac3g02173 716 MobiDBLite consensus disorder prediction 579 623 - -
Phac3g02173 716 SUPERFAMILY Fibronectin type III 325 404 IPR036116 GO:0005515
Phac3g02173 716 Pfam Fibronectin type III domain 325 400 IPR003961 GO:0005515
Phac3g02173 716 MobiDBLite consensus disorder prediction 420 482 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g02173 Phac-Chr3 24855820 24861039 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g02173 1 453 PHD Gene Family AT4G30200 55.556 4.78e-160 474
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g02173 - - gmx:100794721 1320.06