Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g02164 ATGGAAGGGCAAGTAGCTAAACGCAGACGTGTATACTCTGTGGAACCAAACCAAATAGTGAGATCTATATTTACTAGGAATTATTTGAACCATTTAGTTCCAGCGTTGGTGAAGATAAAGGAAAAGAGCTCTATAGAAGATAACAGCCATTGTGATATTAACAATGCTGTCAAGTATGAGGTGGACATGGCAATGGTGTTGTCAGCACAAGGTTTTGCATGGAGTAACGGCCTTAAAGTCAAGCTTCAAAACGATCATTTTCGTGTCAATGCAGCTAAAAGCAGTACGTTTCTTGAAAATGAGGCTGGTGAAGGTTCACCAAGGGCTTGTGACAAAAATGAGGTTGTCCCAATGGAATTCTCTTCAAACCCTAGCTCGAAGTCTAAGGTTGAGGCTTTAGGGAGCAAGTCTAAGTGCAAGGAATTGTCAGAAATGGAAAGGGATTTGGCCAGAGAAGATGATAATGAAGATGAGGACATCAACAAGCAGTTGAAGAGGCTGAGAAGGTTAATACCTGGAGGAGAAGAGATGTGTGATGAACAAATGGGTAAAGAGCTTGAGAGTTACATAAGCTGTTTGCAAATGCAGGTGAACGCTCTTCAGTTTCTGCTGCCACAGACGCGTTAA 627 0.4195 MEGQVAKRRRVYSVEPNQIVRSIFTRNYLNHLVPALVKIKEKSSIEDNSHCDINNAVKYEVDMAMVLSAQGFAWSNGLKVKLQNDHFRVNAAKSSTFLENEAGEGSPRACDKNEVVPMEFSSNPSSKSKVEALGSKSKCKELSEMERDLAREDDNEDEDINKQLKRLRRLIPGGEEMCDEQMGKELESYISCLQMQVNALQFLLPQTR* 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g02164 208 CDD bHLH_AtIBH1_like 151 204 IPR044549 GO:0006355
Phac3g02164 208 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 23 203 IPR044660 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g02164 Phac-Chr3 24728540 24729919 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g02164 1 82 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G30180 49.398 3.13e-16 71.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g02164 - - gmx:100775329 298.13