Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g02109 ATGGGAACTCCACCAACGGATGAACTCGTGAAGAAGATCCAACAGTTAGAAGAAGGACACGCGCACTTGAAGCAAGAAATGTCAAAGCTCAAACTCTCCGATGTCAGACACGGACATCGCCAGAGGTCGCACTCCGTCTCTCCGCAGCGTTCCAGGTTGGGCGCTCCCCCGAGGAGGCGGACCGATGCACCGGCGGCTGCGTGGAAAAGAGGTTCGTGTTCCTTTAAACAATCCTCGCCGCTGCAGAGAGAGAGCCGCGGCGGCGGGGATCCTCAAATTCACGGCGGCGGCGGCGGAGGAGGAGGAGGAGAAGGTGCTACTCCGCGCCGTGGTCCTTCCGCCGTGAACTTTACGGAACGACAGTATCTTAATATTTTGCAGTCAATGGGACAGTCTGTTCATATATTGGATCTTAACTGTCGCATAATATACTGGAACCGTAGTGCGGAAAATCTGTATGGTTATACAGCAGAGGAAGCTTTAGGGCGGGATGGGATTGAGCTGCTTGTAGACCCTCGGGATTTGGGTTTGGCCAATGATACAGTGAACCGTGTGATGGTGGGAGAGAATTGGACGGGGCAATTTCCGGTCAAGAATAAGATGGGAGAGAAGTTCTTAGCTGTAGCGACTAATACACCTTTCTATGATGATGATGGAAGCTTAGTTGGGATAATTTGTGTCTCTTGTGATTCACGGCCCTTTCTTGAAATGAAAGTTCCGATGTCTGGTGTAAGGAACACTGAGTCGGATTTGGACTCGGGTGGAACTCGATCTAGAAGTAGCATTACGAATAAACTTGGCATTGACACTCAGCAGCCACTTCAAGTTGCTATTGCGTCAAAAATTTCAAATTTGGCATCAAAGGTGAGTAACAAAGTAAGGTCAAGGATCTGGACGGGAGAAAATAATGTGGATCGTGAAGGTGGGAGCGGTGAAAGTCATAATTCTGAGCATAGTTTGTTGGAATCTGTTCTTTCGGACCAGAGAGAGGATGCTAATTCCAGTGGAGCTAGCACCCCCAGAGGTGATGTGCCACCGTTCCATTTTGGTGTGTTTTCTCATGGCGAAGAAAAATCCCAGGGAAAATCTTCGAGAGAGTCTGGTGACGAGAGTGAAGGGAAATCTATTCACAAGAGCATACCTGCTAAGGCTGAAGCCTGGATTCAAAGGAAAACATTATCATGGCCATGGAGAACAAAGGACCGAGAAGGTTCAGATGGATCAGAGGGAAGCAAAGTTCGTGTTACTGGGCCCTGGAGACAGAATGATCGAGAAAGTGAATCAGTTCATCAGAAGATTCTTTCTTCTGGCTTGAAGCAAGAAAGCCAGGGAGGTGAAAGTAATCGCCCTAATAACAATGAGGTTTCAGGATCCTGGTCCTCCTTTAATGTTAACAGCACAAGCAGTGCCAGCAGCTGTGGGAGTGCTGGCAGTTGTGCTGTCAATAATAAAGTGGATGTGGACACTGATTGCTTGGATTATGAAATTTTGTGGGAGGACCTGACAATTGGAGAACAAATTGGGCAAGGTTCTTGTGGAACTGTATATCATGCTCTGTGGTATGGATCAGATGTTGCCGTTAAAGTTTTCTCAAAGCAAGAATATTCAGATGAATTGATACTGTCCTTCAGACAAGAGGTGTCTGTCATGAAAAGACTTCGACACCCAAATATTCTTCTCTTTATGGGGGCCGTGACTTCACCTCAACGTCTCTGCATCGTGACAGAGTTTCTCCCGCGTGGAAGCTTGTGCCGCTTGTTACACAGAAACACTTCAAAACTTGACTGGAGACGGAGAGTTCATATGGCCTTGGATATTGCACGGGGCGTAAATTATCTTCATCATTCTAACCCACCTATCATCCACAGAGATTTGAAGTCTTCAAATCTTCTAGTTGATAAGAACTGGACTGTGAAGGTTGGTGATTTTGGTCTTTCACGAGTTAAGCATGAAACATATCTCACAACTAAGACTGGAAGGGGCACGCCTCAATGGATGGCACCCGAAGTTCTTCGAAATGAACCCTCCGATGAGAAATCTGACGTTTATAGCTTTGGAGTGATATTATGGGAAATTGCAACTGAAAAGATACCTTGGGATAATCTCAACTCAATGCAGGTGATTGGAGCTGTCGGATTCATGAATCAACGGCTAGAAATTCCAAAAAATATCGATCCACGGTGGGCTTCTATAATTGAGAGCTGCTGGCACACCGATCCAGCATGCCGGCCAACGTTCCCGGAACTGCTTGATAGGCTTAGAGAGCTGCAAAAACAGTATGCCATTCAGTTCCAGGCAACCCGATCCGCCAGCAAGGAAAGTACCCAAAAAGAGTCCTAG 2340 0.4697 MGTPPTDELVKKIQQLEEGHAHLKQEMSKLKLSDVRHGHRQRSHSVSPQRSRLGAPPRRRTDAPAAAWKRGSCSFKQSSPLQRESRGGGDPQIHGGGGGGGGGEGATPRRGPSAVNFTERQYLNILQSMGQSVHILDLNCRIIYWNRSAENLYGYTAEEALGRDGIELLVDPRDLGLANDTVNRVMVGENWTGQFPVKNKMGEKFLAVATNTPFYDDDGSLVGIICVSCDSRPFLEMKVPMSGVRNTESDLDSGGTRSRSSITNKLGIDTQQPLQVAIASKISNLASKVSNKVRSRIWTGENNVDREGGSGESHNSEHSLLESVLSDQREDANSSGASTPRGDVPPFHFGVFSHGEEKSQGKSSRESGDESEGKSIHKSIPAKAEAWIQRKTLSWPWRTKDREGSDGSEGSKVRVTGPWRQNDRESESVHQKILSSGLKQESQGGESNRPNNNEVSGSWSSFNVNSTSSASSCGSAGSCAVNNKVDVDTDCLDYEILWEDLTIGEQIGQGSCGTVYHALWYGSDVAVKVFSKQEYSDELILSFRQEVSVMKRLRHPNILLFMGAVTSPQRLCIVTEFLPRGSLCRLLHRNTSKLDWRRRVHMALDIARGVNYLHHSNPPIIHRDLKSSNLLVDKNWTVKVGDFGLSRVKHETYLTTKTGRGTPQWMAPEVLRNEPSDEKSDVYSFGVILWEIATEKIPWDNLNSMQVIGAVGFMNQRLEIPKNIDPRWASIIESCWHTDPACRPTFPELLDRLRELQKQYAIQFQATRSASKESTQKES* 780
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g02109 779 ProSitePatterns Serine/Threonine protein kinases active-site signature. 620 632 IPR008271 GO:0004672|GO:0006468
Phac3g02109 779 Gene3D PAS domain 130 232 - -
Phac3g02109 779 MobiDBLite consensus disorder prediction 245 266 - -
Phac3g02109 779 Gene3D Phosphorylase Kinase; domain 1 494 578 - -
Phac3g02109 779 MobiDBLite consensus disorder prediction 398 460 - -
Phac3g02109 779 NCBIfam PAS domain S-box protein 119 227 IPR000014 -
Phac3g02109 779 SUPERFAMILY PYP-like sensor domain (PAS domain) 124 227 IPR035965 -
Phac3g02109 779 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 201 759 - -
Phac3g02109 779 Pfam PAS fold 121 227 IPR013767 GO:0006355
Phac3g02109 779 CDD PAS 129 230 IPR000014 -
Phac3g02109 779 SUPERFAMILY Protein kinase-like (PK-like) 490 753 IPR011009 -
Phac3g02109 779 MobiDBLite consensus disorder prediction 31 113 - -
Phac3g02109 779 MobiDBLite consensus disorder prediction 431 460 - -
Phac3g02109 779 SMART serkin_6 501 761 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac3g02109 779 MobiDBLite consensus disorder prediction 358 379 - -
Phac3g02109 779 Pfam Protein tyrosine and serine/threonine kinase 501 753 IPR001245 GO:0004672|GO:0006468
Phac3g02109 779 CDD STKc_MAP3K-like 507 753 - -
Phac3g02109 779 ProSiteProfiles Protein kinase domain profile. 501 756 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac3g02109 779 MobiDBLite consensus disorder prediction 300 385 - -
Phac3g02109 779 Coils Coil 6 33 - -
Phac3g02109 779 PRINTS Tyrosine kinase catalytic domain signature 614 632 IPR001245 GO:0004672|GO:0006468
Phac3g02109 779 PRINTS Tyrosine kinase catalytic domain signature 661 671 IPR001245 GO:0004672|GO:0006468
Phac3g02109 779 PRINTS Tyrosine kinase catalytic domain signature 575 588 IPR001245 GO:0004672|GO:0006468
Phac3g02109 779 PRINTS Tyrosine kinase catalytic domain signature 680 702 IPR001245 GO:0004672|GO:0006468
Phac3g02109 779 PRINTS Tyrosine kinase catalytic domain signature 724 746 IPR001245 GO:0004672|GO:0006468
Phac3g02109 779 MobiDBLite consensus disorder prediction 314 340 - -
Phac3g02109 779 ProSiteProfiles PAS repeat profile. 118 189 IPR000014 -
Phac3g02109 779 Gene3D Transferase(Phosphotransferase) domain 1 579 779 - -
Phac3g02109 779 MobiDBLite consensus disorder prediction 246 266 - -
Phac3g02109 779 SMART pas_2 120 187 IPR000014 -
Phac3g02109 779 FunFam PAS domain-containing protein tyrosine kinase 494 578 - -
Phac3g02109 779 FunFam PAS domain-containing protein tyrosine kinase family protein 579 771 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g02109 Phac-Chr3 24047064 24054899 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g02109 1 770 MAP Kinase Kinase Kinase AT3G06620 59.439 0.0 936
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Phac3g02109 PK_Tyr_Ser-Thr 1.8e-68 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g02109 - - pvu:PHAVU_003G114400g 1478