Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g02090 ATGGAGGAGAAGAGAGAGAAAGAAGCGAACTCAAAGTCATCATCCACCATGGCAAATTCTGTGGCATTTTCCGACGAGATTCCCAACATGACCATGACCATGTCCTTCCCTTTCTCCCCTGCTTTCTCCACCATCTTTGACATCATGCCACCTCTTCCACCACCACCATCTTCATCTTTCTCCCACGATCCAAAAGCTCCAAGCTTTGCCTTCCTGGACTTGCTGGCTGTCCCTGATTATACCCCTTCCTTATTCGACTGGCCCCAAAACACCGCCGTCGCCTCACCCCCACCGCCACCACCCCCCACCCAAATCACCCACCCGCTTCCCTCGCCTGCCAGCTCCAATGTCCCCGACGGAGGCTCCGAGGTCCTCAACACTCCGCCGTCTCCAAACTACTCCTCGATTTCCTCCTCGTCGAATGAGGCCGCCGCGGCCGCCGCCAACAAAGCAACTGGAAATGAAGATGAAGCTGAGGAGGATGAAACGACAACAGATGCAGCAGGCAAAGGAGAAGACCAAGATCAAGACAAGTCTAAGAATCAGCTGAAGCCAAAAAAGAAGCACCAAAAGAAGCCAAGGGAACCAAGATTTGCGTTCATGACAAAGAGTGAAGTGGATCACCTCGACGATGGCTATAGGTGGCGCAAGTACGGTCAGAAAGCCGTCAAAAACAGCCCTCATCCCAGGAGCTACTATCGTTGCACCACCGCGGCATGCGGCGTGAAGAAGCGCGTGGAGCGTTCCTCGGAGGACCCTTCGGTGGTGGTGACAACCTACGAGGGGCAACACACGCACCCTTGTCCTGCCACGTCACGGGCTAGCCTCGGGTTCTTGCACTCCGAACCAAGTGTGCTCGGACCCACCAGTGGACTCTTTATGCTGCCCCAACAACACCAACAGTTTCGTCATGACCAAGCACAAGCACAGGCACAAGCTCAAGCTCAAGTAGCAATGTTATACAACTCCACCACCACCTCATCTCCATCATCACATTTGAATGTTGTTAACTCAGCTACTTGTGTAAACAACTATGCCAATGCGTCGTCTTTGAGTGGGTTCTTTCAGAGCCAAGAGAATGAGCGAGGTTTTGCGCCATCTAGTATGGGAGGTCCTCATCAGGGTTTGTTCAATGGGCTTCTTCAGGACATTGTGCCAACGCAGATGATGAGTGAAGAGAGGGGAGATCGTGTGTAG 1197 0.5305 MEEKREKEANSKSSSTMANSVAFSDEIPNMTMTMSFPFSPAFSTIFDIMPPLPPPPSSSFSHDPKAPSFAFLDLLAVPDYTPSLFDWPQNTAVASPPPPPPPTQITHPLPSPASSNVPDGGSEVLNTPPSPNYSSISSSSNEAAAAAANKATGNEDEAEEDETTTDAAGKGEDQDQDKSKNQLKPKKKHQKKPREPRFAFMTKSEVDHLDDGYRWRKYGQKAVKNSPHPRSYYRCTTAACGVKKRVERSSEDPSVVVTTYEGQHTHPCPATSRASLGFLHSEPSVLGPTSGLFMLPQQHQQFRHDQAQAQAQAQAQVAMLYNSTTTSSPSSHLNVVNSATCVNNYANASSLSGFFQSQENERGFAPSSMGGPHQGLFNGLLQDIVPTQMMSEERGDRV* 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g02090 398 SUPERFAMILY WRKY DNA-binding domain 201 269 IPR036576 GO:0003700|GO:0006355|GO:0043565
Phac3g02090 398 SMART WRKY_cls 209 268 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phac3g02090 398 Gene3D WRKY domain 195 270 IPR036576 GO:0003700|GO:0006355|GO:0043565
Phac3g02090 398 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 116 311 IPR044810 GO:0003700
Phac3g02090 398 MobiDBLite consensus disorder prediction 92 108 - -
Phac3g02090 398 FunFam WRKY transcription factor 57 195 269 - -
Phac3g02090 398 Pfam WRKY DNA -binding domain 210 267 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phac3g02090 398 ProSiteProfiles WRKY domain profile. 204 269 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phac3g02090 398 MobiDBLite consensus disorder prediction 109 147 - -
Phac3g02090 398 MobiDBLite consensus disorder prediction 164 182 - -
Phac3g02090 398 MobiDBLite consensus disorder prediction 88 198 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g02090 Phac-Chr3 23724791 23727117 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g02090 13 392 WRKY Transcription Factor Family AT5G49520 39.141 9.29e-53 179
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Phac3g02090 WRKY 1.3e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g02090 - - gmx:100808190 468.388