Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g02068 ATGAACATCATCAATGTTATTCTGATTCTCCCTTTCCTATGTTTCTTTCTTCTGAGTACTTCCTTCATTAAAGCATCTGCATTAAATGCAACCTATGAGTCTGATAGAATAATCGATCTTCCTGGTCAACCTTCCAGCCCTTCACTATCACACTTTTCAGGTTACATCACTGTCAATGAAAACCATGGAAGGGCCCTTTTCTACTGGTTCTTTGAAGCTCAGTCTGAACCCTCCAAGAAGCCTCTCCTTCTCTGGCTCAATGGAGGACCCGGATGCTCCTCTATTGGGTATGGTGCCGTTGTTGAGATTGGACCTCTTATAGTCAACAAAAACGGGGAAGGACTACTTTTCAACAAATATTCTTGGAATCAAGAAGCAAATTTGTTGTTTGTGGAGTCCCCTGTTGGAGTTGGATTTTCTTATACTAACACCTCTTCTGACACCATATTAGAGGATAACTTTGTCGCTGAGGATGCCTACAATTTCTTGGTGAATTGGCTAGAAAGATTCCCACAGTTCAAATCCCGGGACTTTTTTATATCAGGAGAAAGCTATGGTGGACACTATATCCCTCAGCTTGCAGAGTTAATCTTCGATCGAAACAAAGATAGCAACAAATACCCCTTTATTAATCTTAAAGGTTTTATTGTTGGTAACCCAGAGACTGATGACTACTATGACTATAAAGGACTTCTGGAATATGCATGGAGCCACGCAGTTATATCAGACCAGCAATATGAGAAAGCAAAACAAGTATGTGATTTTAAACAATTTGAATGGTCAAATGAATGCAACAGGGCCATGAACGAAGTCTTCCATGATTACTCAGAAATTGACATATACAACATTTATGCCCCGACATGTCCTTTAAACAGCACATCCTCAATAGCTGATGAGAGCAACAGTATCGGCCATGAATCATTTACCAAGGTGAGAAATGACCACAGAGAAAGGAGGATGAGAATTTTTGGAGGCTATGACCCTTGTTTTTCCAATTATGCAGAAGAATATTTCAATAGAAAAGATGTTCAATCATCTTTTCATGCAGATACTAATAGAGCCACTAACGTGGCATGGAAGGTTTGCAATAATTCCATATTGAGGGCTTACAACTTCTCTGTTTTCTCGGTCCTACCTATATACACCAAACTCATCAAGGGTGGGCTTAAGATATGGATTTACAGTGGAGATGCAGATGGGAGAGTGCCGGTGATAGGGACACGATATTGTGTTGAGGCTCTGGGATTACCTCTCAAGTCTAGGTGGCAAACATGGTACCATGATAATCAGGTTGGAGGAAGAATAGTGGAATATGAAGGATTGACATATGTGACAGTGAGAGGGGCTGGTCACTTGGTGCCATTGAACAAGCCCACTCAAGCTCTCTCCCTTATTCATTCTTTCTTAACAGCCAACCATCTTCCTACTCGTGGATAA 1437 0.4092 MNIINVILILPFLCFFLLSTSFIKASALNATYESDRIIDLPGQPSSPSLSHFSGYITVNENHGRALFYWFFEAQSEPSKKPLLLWLNGGPGCSSIGYGAVVEIGPLIVNKNGEGLLFNKYSWNQEANLLFVESPVGVGFSYTNTSSDTILEDNFVAEDAYNFLVNWLERFPQFKSRDFFISGESYGGHYIPQLAELIFDRNKDSNKYPFINLKGFIVGNPETDDYYDYKGLLEYAWSHAVISDQQYEKAKQVCDFKQFEWSNECNRAMNEVFHDYSEIDIYNIYAPTCPLNSTSSIADESNSIGHESFTKVRNDHRERRMRIFGGYDPCFSNYAEEYFNRKDVQSSFHADTNRATNVAWKVCNNSILRAYNFSVFSVLPIYTKLIKGGLKIWIYSGDADGRVPVIGTRYCVEALGLPLKSRWQTWYHDNQVGGRIVEYEGLTYVTVRGAGHLVPLNKPTQALSLIHSFLTANHLPTRG* 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g02068 478 Gene3D - 377 470 - -
Phac3g02068 478 SUPERFAMILY alpha/beta-Hydrolases 33 474 IPR029058 -
Phac3g02068 478 Gene3D - 329 366 - -
Phac3g02068 478 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 38 458 IPR001563 GO:0004185|GO:0006508
Phac3g02068 478 ProSitePatterns Serine carboxypeptidases, histidine active site. 441 458 IPR033124 GO:0004185
Phac3g02068 478 FunFam Carboxypeptidase 31 290 - -
Phac3g02068 478 Gene3D alpha/beta hydrolase 29 298 IPR029058 -
Phac3g02068 478 ProSitePatterns Serine carboxypeptidases, serine active site. 180 187 IPR018202 GO:0004185
Phac3g02068 478 PRINTS Carboxypeptidase C serine protease (S10) family signature 118 130 IPR001563 GO:0004185|GO:0006508
Phac3g02068 478 PRINTS Carboxypeptidase C serine protease (S10) family signature 166 191 IPR001563 GO:0004185|GO:0006508
Phac3g02068 478 PRINTS Carboxypeptidase C serine protease (S10) family signature 441 454 IPR001563 GO:0004185|GO:0006508
Phac3g02068 478 PRINTS Carboxypeptidase C serine protease (S10) family signature 131 141 IPR001563 GO:0004185|GO:0006508
Phac3g02068 478 FunFam Carboxypeptidase 377 471 - -
Phac3g02068 478 Pfam Serine carboxypeptidase 41 470 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g02068 Phac-Chr3 23381612 23384656 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g02068 359 474 Calmodulin-binding Proteins AT2G22960 29.060 5.51e-12 62.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g02068 K16297 - gmx:100792930 893.649