Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g02039 ATGGCTGAGACCACAAAATACATTCCCAACTCACAATTAGAGCTTGAAGAGATATTTCAAGAAGCAGCACATCGTTGGCTTCGACCTGTTGAAATATGCGAGATACTTCGCAACTATAAGAAGTTTAAGTTAACACCAGATCCACCTATTAGGCCACCAGCTGGATCACTATTCTTGTTCAATCGAAAAGCACTTCGTTATTTTCGCAAGGATGGTCACAGGTGGAGGAAGAAAAAAGATGGGAAAACCGTAAGAGAAGCTCACGAAAAGTTGAAGGCTGGTAGTGTGGATGTCTTGCATTGTTATTATGCTCATGGAGAGGATAATGAAAATTTCCAACGGAGAAGTTTTTGGATGCTTGACGAGCACTTACAGCACGTTGTCCTTGTTCATTATCGTCAAATTAAAGAGGGCTGCAATTCTGGCATCTCACATTTTCCGATAGTTCCAGTAACCCTGGTTGGTAGCTCTCAAAATAGTTCAGTGCTTTGCTCTACCAAAATAAACACACCAATATCTGTAGTTCAAACATCTTTCACATCAAGTGCAAATAAAGTTGATCAGAATGGAGACTCTTCAGAGAACGAGGATGTCAATTCAAAAGATGATCCTCAAGCCTTCTCTCATGCTCAGCCTATCAGCAATTCCATAATTCACAGTGCACCTTCGTTTACACATGAAGTTGCTGGTTTTTCTGAGTTGTTGAGGAACCCCTTGATTTCAACATGGTCATCTACTTTCCCTAGCTATTCTCCTGGTACTGTCTTGTCTCCCTGGACGTTAATTCAGAATTCTAGCAGAAACACAATTTATATGCACGATGAAAGACATCATATTGAAGGATCTGTTGAGGGCTCAGAAGCTGACTTCATTGTTCATAAGCTAAACAATGCTAAGTTAGATGCTGCTAACAGAATGCAAGATGGTGTAATTTTCAGAGATAGGCTCGTCACTGACATGTACATCCAACCAGATGAAGAAAATTTACTGACTGTTGAGCAGGTTCAAAACGAGGATGGTCTAGATACATTCCGTGCTCACTTATATGACCATAATGATCATCCAATTGTTGCAACTACTAAAGCGCAAGTTGAACAGAAAATTAAAGGTGGTGGTTCAGACAACGATGAATCAAAATGGGTTGAATCTGGGGAAATGAAGAAACTTGATAGTTTTGGAAGGTGGATGGATAAGGAGATTGGAGGAGACTGTGAAAATTCTTTGGTGGCTTCAGATTCTGGTAATTATTGGAGTACAGTTGGTGCTGATAACGAGGATAAGGAGGTATCTAGTTTACGAGACATACAATTGGATATGGATTCATTAGGCCCTTCTCTTTCCCAAGAACAACTATTTAGTATCCATGACTTTTCTCCAGACTGGGCATATACTGGGGTTAGAACAAAGGTTTTAATAGTTGGCACATTTCTCGGAAGTAAAAAGCTCTCTAATGAAACCAAATGGGGATGTATGTTTGGTGAAATTGAGGTTTCTGCTGAAGCTTTAACGGATAATGTGATACGGTGTCAGACTCCTTTGCACTCACCTGGTCGTGTACCATTCTATGTTACCTGCAGTAATAGATTAGCTTGCAGTGAGGTCAGGGAATTTCAATTTGATGAACATCCAACCAAATTTTTAGGTCCTTTGGGTATTAAAATCTCACCAGAAGTTGAGATCCGACTTCAAATGCGACTTCTTAAACTAGTAGACTTCGGACCTGACAATAAGTGCTTGAAGTGCTCTGTTTCTGATTGTGAAAAATGTAAACTCAAGGGAATAATGTATTCCACGAGAGATGGTAGTGGAGTTTTTAAAGAAACTTTCCGGATTGATGGAATTGATCATATAAACCCTAGAGATATACTATTTCAGAGATTAATGAGAGACAAGCTTTATGAGTGGTTGATATACAAGGTTCATGAAGGAGGAAAAGCATCACATGTGTTGGATGATGAGGGCCAAGGAGTAATACATTTGGCAGCTGCACTTGGTTATGTGTGGGCTATGGCCCCATTAGTTGCTGCTGGTATCAGTCCTAACTTCAGAGACAATCGTGGAAGAACAGGACTTCATTGGGCATCCTATTTTGGGAGAGAAGAAACTGTTATTGCTCTTGTCAAATTAGGCGCAGCTCCAGGTGCGGTTGAGGATCCAACGTCAGCACTTCCTCCAGGTCAAACAGCTGCTGATTTAGCTTCAAGTAGAGGACATAAAGGCATTGCTGGGTATTTGGCGGAGGCAGTTCTGATTAATCAACTATCTCTACTGACTGTCAAGAAAAATGAGACTGGTAACATTGCAACAACCATAGCAGCTGACAGTGCTTTTCATTCTGCTGACAATGACTCGTCTAATTTGACAATGGATGAGCAACACTATCTCAAAGAGTCCCTTGCTGTGTTTCGAAAATCAGCTCATGCAGCTGCTTCAATCCTAGCAGCCTTTAGAGCAAGGTCATTTTGTCAGAGACAATTAGCCAAAAGTAGAAGTGATATTTCAGACTCAGTACTTGACATAGTTGCCGATTCTTTGAGCAAGGTACAGAAGATGGGTCATTTTGAGGATTATTTACATTTTGCAGCTTTAAAGATTCAAAAGAGATATCGTGGATGGAAAGGAAGAAAGGACTTTTTGAAGGTAGCCAACCGCATTGTAAAAATCCAGGCTCATATTAGAGGACACCAAGTTCGTAAGCAATACAAAAAAATTGTGTGGTCTGTTAGCATTGTGGAAAAAGTGATTCTTCGTTGGAGACGGAAAGGAGCTGGTCTGCGAGGATTCCGGGGAGAGCAGCCGGGTGGTGTTGATGAGTATGACTTTCTTAGCGGTGGGAGGAGACAGAAATCAGAAGATGTAAAGAAAGCTCTGGATAGAGTCAAGTCCATGGTTCGCAACCCAGAGGCAAGGGATCAGTATTTGAGGCTCATCATGAAATATCAAGTTTAA 2949 0.4093 MAETTKYIPNSQLELEEIFQEAAHRWLRPVEICEILRNYKKFKLTPDPPIRPPAGSLFLFNRKALRYFRKDGHRWRKKKDGKTVREAHEKLKAGSVDVLHCYYAHGEDNENFQRRSFWMLDEHLQHVVLVHYRQIKEGCNSGISHFPIVPVTLVGSSQNSSVLCSTKINTPISVVQTSFTSSANKVDQNGDSSENEDVNSKDDPQAFSHAQPISNSIIHSAPSFTHEVAGFSELLRNPLISTWSSTFPSYSPGTVLSPWTLIQNSSRNTIYMHDERHHIEGSVEGSEADFIVHKLNNAKLDAANRMQDGVIFRDRLVTDMYIQPDEENLLTVEQVQNEDGLDTFRAHLYDHNDHPIVATTKAQVEQKIKGGGSDNDESKWVESGEMKKLDSFGRWMDKEIGGDCENSLVASDSGNYWSTVGADNEDKEVSSLRDIQLDMDSLGPSLSQEQLFSIHDFSPDWAYTGVRTKVLIVGTFLGSKKLSNETKWGCMFGEIEVSAEALTDNVIRCQTPLHSPGRVPFYVTCSNRLACSEVREFQFDEHPTKFLGPLGIKISPEVEIRLQMRLLKLVDFGPDNKCLKCSVSDCEKCKLKGIMYSTRDGSGVFKETFRIDGIDHINPRDILFQRLMRDKLYEWLIYKVHEGGKASHVLDDEGQGVIHLAAALGYVWAMAPLVAAGISPNFRDNRGRTGLHWASYFGREETVIALVKLGAAPGAVEDPTSALPPGQTAADLASSRGHKGIAGYLAEAVLINQLSLLTVKKNETGNIATTIAADSAFHSADNDSSNLTMDEQHYLKESLAVFRKSAHAAASILAAFRARSFCQRQLAKSRSDISDSVLDIVADSLSKVQKMGHFEDYLHFAALKIQKRYRGWKGRKDFLKVANRIVKIQAHIRGHQVRKQYKKIVWSVSIVEKVILRWRRKGAGLRGFRGEQPGGVDEYDFLSGGRRQKSEDVKKALDRVKSMVRNPEARDQYLRLIMKYQV* 983
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g02039 982 ProSiteProfiles IQ motif profile. 882 909 IPR000048 GO:0005515
Phac3g02039 982 FunFam Calmodulin-binding transcription activator 2 857 905 - -
Phac3g02039 982 SUPERFAMILY Ankyrin repeat 647 748 IPR036770 -
Phac3g02039 982 SMART CG_1_2 18 136 IPR005559 GO:0003677
Phac3g02039 982 CDD IPT 453 539 - -
Phac3g02039 982 Gene3D - 626 749 IPR036770 -
Phac3g02039 982 SMART iq_5 857 879 IPR000048 GO:0005515
Phac3g02039 982 SMART iq_5 880 902 IPR000048 GO:0005515
Phac3g02039 982 SUPERFAMILY E set domains 454 539 IPR014756 -
Phac3g02039 982 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA 15 980 - -
Phac3g02039 982 Pfam IPT/TIG domain 454 531 IPR002909 -
Phac3g02039 982 ProSiteProfiles Ankyrin repeat profile. 686 718 IPR002110 GO:0005515
Phac3g02039 982 Pfam CG-1 domain 21 134 IPR005559 GO:0003677
Phac3g02039 982 Pfam IQ calmodulin-binding motif 861 878 IPR000048 GO:0005515
Phac3g02039 982 Pfam IQ calmodulin-binding motif 885 902 IPR000048 GO:0005515
Phac3g02039 982 Gene3D - 856 905 - -
Phac3g02039 982 MobiDBLite consensus disorder prediction 183 206 - -
Phac3g02039 982 Gene3D Immunoglobulins 447 545 IPR013783 -
Phac3g02039 982 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 853 909 IPR027417 -
Phac3g02039 982 FunFam Calmodulin-binding transcription activator 2 447 544 - -
Phac3g02039 982 ProSiteProfiles CG-1 DNA-binding domain profile. 15 141 IPR005559 GO:0003677
Phac3g02039 982 ProSiteProfiles IQ motif profile. 858 887 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g02039 Phac-Chr3 23029040 23037274 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g02039 59 977 CAMTA Transcription Factor Family AT2G22300 38.889 0.0 583
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CAMTA Phac3g02039 CG-1 9.6e-48 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g02039 K21596 - gmx:100818336 1652.49