Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g02024 ATGTTTAAGGTAGTTCTGCATGTTTGTTTTTCTGTCTGGCCAGTTATCTTTTTGGGATTTACACTTACAGAATTCAGGATCATGGGTTGCTTTGGCTTCTGCAAAGGAGATGACAGTGTTGCAATTTCTGACAGAGGACCTTTCATGCAAAACGCTCCCACTGGGAACGCCAGTTATCATGGCAGACATAATGCAGTGACTGCTCCTCGGCCAATAAATTTTCAACCTATTGCTGTCCCTTCTATTACAGTAGACGAATTGAAGTCTTTAACAGATAGTTTTGGCTCAAAATCTTTCATTGGTGAGGGTGCATATGGGAAAGTATATCAAGCTACATTGAAAACTGGGCGTGCAGTGGTAATCAAAAAGCTAGATTCCAGTAATCAGCCAGAGCAAGAATTTCTTTCTCAGGTCTCCATCGTATCAAGGCTAAGGCATGAAAATGTTGTTGAGCTTGTTAACTATTCTGTTGATGGTTCTTTTCGTGCCCTTTCCTATGAGTATGCTCCTAAAGGATCCCTTCATGATATTCTACACGGACGAAAAGGTGTCAAGGGTGCACAACCTGGTGCATTACTCTCGTGGGCTCAGAGAGTTAAAATTGCTGTTGGAGCAGCCAGGGGACTTGAATATCTTCATGAAAAGGCAGAGATTCATATAATCCATCGTTATATTAAGTCTAGTAACATACTTCTTTTTGATGATGATGTTGCAAAGATTGCTGATTTTGATTTGTCAAATCAAGCCCCTGATGCAGCAGCACGTCTTCATTCTACCCGTGTTCTTGGGACTTTTGGTTATCATGCTCCTGAATATGCAATGACGGGACAACTCACTTCAAAAAGTGATGTTTATAGCTTTGGAGTTATACTGCTGGAACTCTTAACCGGGCGCAAACCGGTTGATCATACACTACCCCGAGGACAGCAAAGCCTTGTCACCTGGGCAACACCAAAGCTTAGTGAAGATAAGGTGAAGCAGTGTGTTGATGTTAGACTAAAGGGAGAGTACCCTTCAAAGTCCGTTGCAAAGATGGCTGCTGTTGCTGCATTGTGTGTACAATATGAAGCTGAGTTTCGGCCAAACATGAGCATTATAGTGAAAGCTTTACAGCCTCTACTGAATACTCGTTCTACTCCCTCAAAGGAATCACCAAACATGTAA 1164 0.4218 MFKVVLHVCFSVWPVIFLGFTLTEFRIMGCFGFCKGDDSVAISDRGPFMQNAPTGNASYHGRHNAVTAPRPINFQPIAVPSITVDELKSLTDSFGSKSFIGEGAYGKVYQATLKTGRAVVIKKLDSSNQPEQEFLSQVSIVSRLRHENVVELVNYSVDGSFRALSYEYAPKGSLHDILHGRKGVKGAQPGALLSWAQRVKIAVGAARGLEYLHEKAEIHIIHRYIKSSNILLFDDDVAKIADFDLSNQAPDAAARLHSTRVLGTFGYHAPEYAMTGQLTSKSDVYSFGVILLELLTGRKPVDHTLPRGQQSLVTWATPKLSEDKVKQCVDVRLKGEYPSKSVAKMAAVAALCVQYEAEFRPNMSIIVKALQPLLNTRSTPSKESPNM* 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g02024 387 CDD STKc_IRAK 100 373 - -
Phac3g02024 387 Pfam Protein tyrosine and serine/threonine kinase 99 370 IPR001245 GO:0004672|GO:0006468
Phac3g02024 387 ProSiteProfiles Protein kinase domain profile. 94 374 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac3g02024 387 Gene3D Phosphorylase Kinase; domain 1 59 168 - -
Phac3g02024 387 PANTHER PTO-INTERACTING PROTEIN 1-LIKE 62 378 - -
Phac3g02024 387 SUPERFAMILY Protein kinase-like (PK-like) 72 370 IPR011009 -
Phac3g02024 387 Gene3D Transferase(Phosphotransferase) domain 1 170 385 - -
Phac3g02024 387 FunFam pto-interacting protein 1 170 381 - -
Phac3g02024 387 ProSitePatterns Protein kinases ATP-binding region signature. 100 123 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g02024 Phac-Chr3 22911064 22915196 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g02024 75 386 Receptor kinase-like Gene Family AT4G02010 47.853 2.52e-88 280
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIII Phac3g02024 PK_Tyr_Ser-Thr 2.7e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g02024 K13436 - gmx:547596 671.389