Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g02000 ATGATCACTGGGGAGAGACAAGCTACAAGAATTAGAAGCTTATACCTTCAAACTATTCTGAGGCAAGATGTCACCTTCTTTGATAAGGAAACAAGAACTGGAGAGGTTGTAGGAAGGATGTCAGGAGATACTGTTCTTATTCAAGATGCCATGGGTGAGAAGGTAGGACAGTTCTTACAGTTATTGGCAGCTTCCATTGGAGGTTTTGTAATAGCATTCATCAGGGGATGGCTTCTAACTGTTGTCATGCTATCTTGTATTCCACCTGTTGTTTTGTGTGGTGCTATGGTAAGCCTGATCATTGCAAAAGCATCATCCAGGGGACAAGAAGCTTATTCCCAAGCTGCAACTGTAGTAGAGCAGACGATAGGTTCTATCCAAACTGTTGCATCATTCACTGGGGAGAAGCAAGCAATAGATAAATATAATCAGTCCTTAATCAAAGCTTACAAGGCTGGAGTGCAAGAGGCAATAGCTTCTGGTTTTGGGTTTGGTTCTCTCTCTTTTGTTTCTACCAGCAGTTATGGTTTGGCTATATGGTTTGGTGCAAAAATGATAATAGAGAAAGGATATACAGGAGGAGAGGTTGTGACAGTAATTATGGCTGTTTTGACTGGCTCCATGTCTCTTGGGCAGGCCTCTCCAAGCTTGAGTGCTTTTAGTGCTGGACAAGCTGCAGCCTTTAAGATGTTCGAAACAATTAAGAGGAAGCCAGAAATCGATGCTTATGGCACAACTGGTCGGCAGCTCGATGACATTTGTGGAGATATAGAACTAAGGGAGGTTTGTTTTAGTTATCCTACAAGACCAGACGAACTGATATTCAATGGATTTTCTCTTTCAATACCAAGCGGCACTACGATCGCTTTGGTTGGTGAAAGTGGGAGTGGGAAATCCACAGTTGTTAGTTTGATAGAGAGATTTTATGATCCACTGTCAGGTGAAGTTCTCATTGATAGTATTAACCTCAAAGAATTTCAACTGAAATGGATCAGAGAGAAAATTGGCCTAGTTAGCCAGGAACCAGTTCTCTTTACTTGTAGTATTAAAGAGAATATTGCCTATGGCAAGGATGATGCAACTATTGAAGAAATCAGAGCATCAGCAGAACTAGCTAATGCTGCCAAATTTATAGATAGGCTTCCTCAGGGACTGGACACAATGGTTGGTGAACATGGAACTCAGCTTTCTGGGGGTCAAAAGCAAAGAGTTGCAATAGCAAGAGCAATTTTGAGAGACCCAAGAATTCTACTTCTGGATGAAGCTACAAGTTCACTCGATGTTGAATCTGAGAAAATTGTACAGGAAGCATTGGACAGAATAATGATAAACCGAACAACTGTCATTGTAGCCCACCGCTTAAGTACTATAAGGAATGCTGATAGCATTGCTGTTCTTCATCATGGAAAAATAGTTGAAAGAGGTTCACATGCTGAGCTCACCGAAGATCCTAACGGAGCCTATAGCCAGCTGATTAGATTGCAAGAAATTAAAGGATCAGAACAAAATGGTGAAAATGACAGAGAGAAGCTAGAAAGTATAGTACACTCTGGCAGACAATCAAGTCAAAGATCTTTCTTAAGATCTATAAGCCAAAGATCATCAGGACTTGAAAGCAGTGGTCATAACTCATTCTCAGCATCACATGGTGTGCCAGTATCAGTTGGCTTCTCGGAACCTGCAAGAGGAGAACCTCAAACACCTCCTTCAACTTCACCACCCGAAGTACCACTCTCTCGCCTGGCATATTTAAACAAGCCAGAGATTCTAGTCTTACTTGCAGGGACTCTAGCTGCAGTAGTAAGTGGATTATTATTACCCATTAGTGCACTCTTCGTTTCCAAAATGATAAGTATTTTCTATGAGCCACATGATGAACTTCGTAAAGATTCAAAGCGTTGGGCATTACTATTTGTTGCACTTGGTGTGGTATCATTTATCACAGCTCCTTGTAGATTGTACCTTTTTGGTGTTGCTGGCGGTAAGTTGATAAAAAGGATTCGGAAAATGTGTTTTGAGAAAGTTGTTCACATGGAAGTTAGCTGGTTCGATGAAGCGGAGCATTCAAGTGGAGCAATTGGAGCGAGGCTCTCTTCTGATGCAGCTGCTGTTCGAGCTTTGGTTGGGGATGCACTTGGTTTGCTGGTTCAAAATGCTGCTACAGCTGTGGGCTGTTTAGTAATTGCATTTGAAGCAAGCTGGCAGCTTGCTTTTATAGTGCTTGCTTTGGCACCGTTATTAGGACTAAATGGATACGTGCAATTTAAGTTCATGAAAGGATTCAGTGCAGATGCAAAGAAACTGTACGAGGAAGCAAGTCAAGTCGCAAGTGATGCTGTAGGGAGTATAAGAACAGTTGCTTCTTTCTGTGCTGAAAAGAAGGTGATGGAATTGTACCAGAAAAAATGTGAAGAACCAATTAGGACAGGCATAAGGCGAGGGATAATAAGTGGAATTGGTTATGGGGTATCATTCTTCATGCTTTACGCAGTTTATGCATGCAGTTTTTATGCTGGAGCTCGACTTGTAAAGGATGGGAAAACAACATTCTCCGATGTTTTCCGTGTGCTTTTTGCCCTCAGCTTGGCAGCAATGGGAATTTCTAGATCTGGCTCTTTGGTCACTGATTCAGCTAAATCAAAAAGCGCTGCCGCTTCTGTATTTGGTGTTCTTGATCGAAAGTCACAAATTGACCCAAGTGATGACTCTGGATTCACATTGGAAGAAGTCAATGGAGAGATTGAATTTATCAATGTCAGTTTCAAGTATCCTACCAGACCTGATGTTCAAATATTCAGAGATCTTTGCTTGACTATTCATAGTGGGAAGACAGTTGCACTGGTTGGGGAAAGTGGAAGTGGAAAATCAACAGTGATCTCACTATTGCAGAGGTTTTATGATCCAGACTCAGGTCAAATTACGCTGGATGGAAAAGAAATCCAAATGATGCAAGTTAAATGGCTAAGACAACAGATGGGCCTGGTGAGCCAAGAGCCTGTGCTGTTTAATGACACCATTCGTGCAAATATTGCATATGGCAAAGGCGGGGATGCAACAGAGGCAGAAATTATAGCTGCAGCAGAACTTGCAAATGCTCATAATTTTACTAGTAGTTTGCAGGAGGGTTATGAAACAATAGTAGGGGAGAGAGGGATTCAACTATCTGGAGGGCAGAAGCAGCGAGTGGCAATTGCGCGAGCTATAGTGAAGAATCCAAAAATATTATTACTAGATGAAGCCACGAGTGCACTTGATGCTGAGTCTGAAAAGGTGGTTCAGGATGCACTAGACCGTGTTATGGTGAACCGAACCACAATAGTAGTGGCTCATAGGTTATCCACTATAAAGGGTGCGGATTTAATTGCAGTAGTTAAAAATGGTGTGATAGCAGAGAAGGGAAAACATGAAGCATTACTGAACAAAGGAGGTGACTATTCTTCCTTAGTAGCATTGCACACAACTGCTTCTACATCCTAG 3477 0.4188 MITGERQATRIRSLYLQTILRQDVTFFDKETRTGEVVGRMSGDTVLIQDAMGEKVGQFLQLLAASIGGFVIAFIRGWLLTVVMLSCIPPVVLCGAMVSLIIAKASSRGQEAYSQAATVVEQTIGSIQTVASFTGEKQAIDKYNQSLIKAYKAGVQEAIASGFGFGSLSFVSTSSYGLAIWFGAKMIIEKGYTGGEVVTVIMAVLTGSMSLGQASPSLSAFSAGQAAAFKMFETIKRKPEIDAYGTTGRQLDDICGDIELREVCFSYPTRPDELIFNGFSLSIPSGTTIALVGESGSGKSTVVSLIERFYDPLSGEVLIDSINLKEFQLKWIREKIGLVSQEPVLFTCSIKENIAYGKDDATIEEIRASAELANAAKFIDRLPQGLDTMVGEHGTQLSGGQKQRVAIARAILRDPRILLLDEATSSLDVESEKIVQEALDRIMINRTTVIVAHRLSTIRNADSIAVLHHGKIVERGSHAELTEDPNGAYSQLIRLQEIKGSEQNGENDREKLESIVHSGRQSSQRSFLRSISQRSSGLESSGHNSFSASHGVPVSVGFSEPARGEPQTPPSTSPPEVPLSRLAYLNKPEILVLLAGTLAAVVSGLLLPISALFVSKMISIFYEPHDELRKDSKRWALLFVALGVVSFITAPCRLYLFGVAGGKLIKRIRKMCFEKVVHMEVSWFDEAEHSSGAIGARLSSDAAAVRALVGDALGLLVQNAATAVGCLVIAFEASWQLAFIVLALAPLLGLNGYVQFKFMKGFSADAKKLYEEASQVASDAVGSIRTVASFCAEKKVMELYQKKCEEPIRTGIRRGIISGIGYGVSFFMLYAVYACSFYAGARLVKDGKTTFSDVFRVLFALSLAAMGISRSGSLVTDSAKSKSAAASVFGVLDRKSQIDPSDDSGFTLEEVNGEIEFINVSFKYPTRPDVQIFRDLCLTIHSGKTVALVGESGSGKSTVISLLQRFYDPDSGQITLDGKEIQMMQVKWLRQQMGLVSQEPVLFNDTIRANIAYGKGGDATEAEIIAAAELANAHNFTSSLQEGYETIVGERGIQLSGGQKQRVAIARAIVKNPKILLLDEATSALDAESEKVVQDALDRVMVNRTTIVVAHRLSTIKGADLIAVVKNGVIAEKGKHEALLNKGGDYSSLVALHTTASTS* 1159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g02000 1158 CDD ABC_6TM_Pgp_ABCB1_D2_like 582 897 - -
Phac3g02000 1158 MobiDBLite consensus disorder prediction 516 547 - -
Phac3g02000 1158 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 903 1151 IPR027417 -
Phac3g02000 1158 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 593 879 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Phac3g02000 1158 CDD ABC_MTABC3_MDL1_MDL2 914 1149 - -
Phac3g02000 1158 ProSitePatterns ABC transporters family signature. 1054 1068 IPR017871 GO:0005524|GO:0016887
Phac3g02000 1158 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 257 493 IPR003439 GO:0005524
Phac3g02000 1158 MobiDBLite consensus disorder prediction 499 547 - -
Phac3g02000 1158 FunFam ABC transporter B family member 1 904 1153 - -
Phac3g02000 1158 SUPERFAMILY ABC transporter transmembrane region 580 898 IPR036640 GO:0005524|GO:0016020
Phac3g02000 1158 PANTHER ABC TRANSPORTER B FAMILY 1 498 IPR039421 -
Phac3g02000 1158 CDD ABC_MTABC3_MDL1_MDL2 257 495 - -
Phac3g02000 1158 Gene3D - 255 508 IPR027417 -
Phac3g02000 1158 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 251 495 IPR027417 -
Phac3g02000 1158 Pfam ABC transporter transmembrane region 593 862 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Phac3g02000 1158 Pfam ABC transporter transmembrane region 2 208 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Phac3g02000 1158 Pfam ABC transporter 934 1082 IPR003439 GO:0005524
Phac3g02000 1158 MobiDBLite consensus disorder prediction 556 575 - -
Phac3g02000 1158 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 914 1151 IPR003439 GO:0005524
Phac3g02000 1158 FunFam ABC transporter B family member 1 572 880 - -
Phac3g02000 1158 Pfam ABC transporter 276 424 IPR003439 GO:0005524
Phac3g02000 1158 CDD ABC_6TM_Pgp_ABCB1_D1_like 1 230 - -
Phac3g02000 1158 Gene3D - 904 1157 IPR027417 -
Phac3g02000 1158 SMART AAA_5 284 472 IPR003593 GO:0016887
Phac3g02000 1158 SMART AAA_5 941 1134 IPR003593 GO:0016887
Phac3g02000 1158 FunFam ABC transporter B family member 1 247 496 - -
Phac3g02000 1158 ProSitePatterns ABC transporters family signature. 396 410 IPR017871 GO:0005524|GO:0016887
Phac3g02000 1158 SUPERFAMILY ABC transporter transmembrane region 2 239 IPR036640 GO:0005524|GO:0016020
Phac3g02000 1158 MobiDBLite consensus disorder prediction 500 515 - -
Phac3g02000 1158 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 1 222 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Phac3g02000 1158 FunFam ABC transporter B family member 9 881 903 - -
Phac3g02000 1158 Gene3D ABC transporter type 1, transmembrane domain 1 884 IPR036640 GO:0005524|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g02000 Phac-Chr3 22729371 22734423 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g02000 1 1157 Calmodulin-binding Proteins AT2G36910 45.120 0.0 969