Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g01997 ATGTCAGAGGATATAGACTTGAATGGAGATTCTGAGAGCAAGCAAGATTCAAAGAGAAATGCCAAAGATGAATGTGCCAAAACAGTACCCTTATACAGACTTTTCTCATTTGCTGATTCTTTTGATTGTTTATTGATGTTTGTGGGGACTGTTGGTGCTATTGCGAATGGAATCTCCCCTCCCTTGATGACTTTGTTATTTGGAAATATGATCAATGCATTTGGAGGAACCAAAAACTCCAGCGAAGTTGTTGATGAAGTTTCCAAGGTGTCTTTGGAAATTGTATACTTGGCTGTGGGAACATCTTTTGCATCACTTTTGCAGTTGACATGCTGGATGATCACTGGGGAGAGACAAGCTACAAGAATTAGAAGCTTATACCTTCAAACTATTCTGAGGCAAGATGTCACCTTCTTTGATAAGGAAACAAGAACTGGAGAGGTTGTAGGAAGGATGTCAGGAGATACTGTTCTTATTCAAGATGCCATGGGTGAGAAGGTAGGACAGTTCTTACAGTTATTGGCAGCTTCCATTGGAGGTTTTGTAATAGCATTCATCAGGGGATGGCTTCTAACTGTTGTCATGCTATCTTGTATTCCACCTGTTGTTTTGTGTGGTGCTATGGTAAGCCTGATCATTGCAAAAGCATCATCCAGGGGACAAGAAGCTTATTCCCAAGCTGCAACTGTAGTAGAGCAGACGATAGGTTCTATCCAAACTGTTGCATCATTCACTGGGGAGAAGCAAGCAATAGATAAATATAATCAGTCCTTAATCAAAGCTTACAAGGCTGGAGTGCAAGAGGCAATAGCTTCTGGTTTTGGGTTTGGTTCTCTCTCTTTTGTTTCTACCAGCAGTTATGGTTTGGCTATATGGTTTGGTGCAAAAATGATAATAGAGAAAGGATATACAGGAGGAGAGGTTGTGACAGTAATTATGGCTGTTTTGACTGGCTCCATGTCTCTTGGGCAGGCCTCTCCAAGCTTGAGTGCTTTTAGTGCTGGACAAGCTGCAGCCTTTAAGATGTTCGAAACAATTAAGAGGAAGCCAGAAATCGATGCTTATGGCACAACTGGTCGGCAGCTCGATGACATTTGTGGAGATATAGAACTAAGGGAGGTTTGTTTTAGTTATCCTACAAGACCAGACGAACTGATATTCAATGGATTTTCTCTTTCAATACCAAGCGGCACTACGATCGCTTTGGTTGGTGAAAGTGGGAGTGGGAAATCCACAGTTGTTAGTTTGATAGAGAGATTTTATGATCCACTGTCAGGTGAAGTTCTCATTGATAGTATTAACCTCAAAGAATTTCAACTGAAATGGATCAGAGAGAAAATTGGCCTAGTTAGCCAGGAACCAGTTCTCTTTACTTGTAGTATTAAAGAGAATATTGCCTATGGCAAGGATGATGCAACTATTGAAGAAATCAGAGCATCAGCAGAACTAGCTAATGCTGCCAAATTTATAGATAGGCTTCCTCAGGGACTGGACACAATGGTTGGTGAACATGGAACTCAGCTTTCTGGGGGTCAAAAGCAAAGAGTTGCAATAGCAAGAGCAATTTTGAGAGACCCAAGAATTCTACTTCTGGATGAAGCTACAAGTTCACTCGATGTTGAATCTGAGAAAATTGTACAGGAAGCATTGGACAGAATAATGATAAACCGAACAACTGTCATTGTAGCCCACCGCTTAAGTACTATAAGGAATGCTGATAGCATTGCTGTTCTTCATCATGGAAAAATAGTTGAAAGAGGTTCACATGCTGAGCTCACCGAAGATCCTAACGGAGCCTATAGCCAGCTGATTAGATTGCAAGAAATTAAAGGATCAGAACAAAATGGTGAAAATGACAGAGAGAAGCTAGAAAGTATAGTACACTCTGGCAGACAATCAAGTCAAAGATCTTTCTTAAGATCTATAAGCCAAAGATCATCAGGACTTGAAAGCAGTGGTCATAACTCATTCTCAGCATCACATGGTGTGCCAGTATCAGTTGGCTTCTCGGAACCTGCAAGAGGAGAACCTCAAACACCTCCTTCAACTTCACCACCCGAAGTACCACTCTCTCGCCTGGCATATTTAAACAAGCCAGAGATTCTAGTCTTACTTGCAGGGACTCTAGCTGCAGTAGTAAGTGGATTATTATTACCCATTAGTGCACTCTTCGTTTCCAAAATGATAAGTATTTTCTATGAGCCACATGATGAACTTCGTAAAGATTCAAAGCGTTGGGCATTACTATTTGTTGCACTTGGTGTGGTATCATTTATCACAGCTCCTTGTAGATTGTACCTTTTTGGTGTTGCTGGCGGTAAGTTGATAAAAAGGATTCGGAAAATGTGTTTTGAGAAAGTTGTTCACATGGAAGTTAGCTGGTTCGATGAAGCGGAGCATTCAAGTGGAGCAATTGGAGCGAGGCTCTCTTCTGATGCAGCTGCTGTTCGAGCTTTGGTTGGGGATGCACTTGGTTTGCTGGTTCAAAATGCTGCTACAGCTGTGGGCTGTTTAGTAATTGCATTTGAAGCAAGCTGGCAGCTTGCTTTTATAGTGCTTGCTTTGGCACCGTTATTAGGACTAAATGGATACGTGCAATTTAAGTTCATGAAAGGATTCAGTGCAGATGCAAAGAAACTGTACGAGGAAGCAAGTCAAGTCGCAAGTGATGCTGTAGGGAGTATAAGAACAGTTGCTTCTTTCTGTGCTGAAAAGAAGGTGATGGAATTGTACCAGAAAAAATGTGAAGAACCAATTAGGACAGGCATAAGGCGAGGGATAATAAGTGGAATTGGTTATGGGGTATCATTCTTCATGCTTTACGCAGTTTATGCATGCAGTTTTTATGCTGGAGCTCGACTTGTAAAGGATGGGAAAACAACATTCTCCGATGTTTTCCGTGTAAGTTACTTCACTCACCGTACTCTTTCGCCAAGTAAAAATTTCCACCACTTCTTGTCGTCACAGTTATGCTGCTAA 2979 0.4139 MSEDIDLNGDSESKQDSKRNAKDECAKTVPLYRLFSFADSFDCLLMFVGTVGAIANGISPPLMTLLFGNMINAFGGTKNSSEVVDEVSKVSLEIVYLAVGTSFASLLQLTCWMITGERQATRIRSLYLQTILRQDVTFFDKETRTGEVVGRMSGDTVLIQDAMGEKVGQFLQLLAASIGGFVIAFIRGWLLTVVMLSCIPPVVLCGAMVSLIIAKASSRGQEAYSQAATVVEQTIGSIQTVASFTGEKQAIDKYNQSLIKAYKAGVQEAIASGFGFGSLSFVSTSSYGLAIWFGAKMIIEKGYTGGEVVTVIMAVLTGSMSLGQASPSLSAFSAGQAAAFKMFETIKRKPEIDAYGTTGRQLDDICGDIELREVCFSYPTRPDELIFNGFSLSIPSGTTIALVGESGSGKSTVVSLIERFYDPLSGEVLIDSINLKEFQLKWIREKIGLVSQEPVLFTCSIKENIAYGKDDATIEEIRASAELANAAKFIDRLPQGLDTMVGEHGTQLSGGQKQRVAIARAILRDPRILLLDEATSSLDVESEKIVQEALDRIMINRTTVIVAHRLSTIRNADSIAVLHHGKIVERGSHAELTEDPNGAYSQLIRLQEIKGSEQNGENDREKLESIVHSGRQSSQRSFLRSISQRSSGLESSGHNSFSASHGVPVSVGFSEPARGEPQTPPSTSPPEVPLSRLAYLNKPEILVLLAGTLAAVVSGLLLPISALFVSKMISIFYEPHDELRKDSKRWALLFVALGVVSFITAPCRLYLFGVAGGKLIKRIRKMCFEKVVHMEVSWFDEAEHSSGAIGARLSSDAAAVRALVGDALGLLVQNAATAVGCLVIAFEASWQLAFIVLALAPLLGLNGYVQFKFMKGFSADAKKLYEEASQVASDAVGSIRTVASFCAEKKVMELYQKKCEEPIRTGIRRGIISGIGYGVSFFMLYAVYACSFYAGARLVKDGKTTFSDVFRVSYFTHRTLSPSKNFHHFLSSQLCC* 993
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g01997 992 MobiDBLite consensus disorder prediction 628 659 - -
Phac3g01997 992 MobiDBLite consensus disorder prediction 1 20 - -
Phac3g01997 992 Gene3D ABC transporter type 1, transmembrane domain 674 989 IPR036640 GO:0005524|GO:0016020
Phac3g01997 992 CDD ABC_MTABC3_MDL1_MDL2 369 607 - -
Phac3g01997 992 CDD ABC_6TM_Pgp_ABCB1_D1_like 46 342 - -
Phac3g01997 992 MobiDBLite consensus disorder prediction 611 659 - -
Phac3g01997 992 FunFam ABC transporter B family member 9 33 365 - -
Phac3g01997 992 SUPERFAMILY ABC transporter transmembrane region 692 985 IPR036640 GO:0005524|GO:0016020
Phac3g01997 992 CDD ABC_6TM_Pgp_ABCB1_D2_like 694 968 - -
Phac3g01997 992 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 47 334 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Phac3g01997 992 PANTHER ABC TRANSPORTER B FAMILY 9 610 IPR039421 -
Phac3g01997 992 MobiDBLite consensus disorder prediction 668 687 - -
Phac3g01997 992 Pfam ABC transporter 388 536 IPR003439 GO:0005524
Phac3g01997 992 Gene3D - 359 608 IPR027417 -
Phac3g01997 992 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 705 982 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Phac3g01997 992 Gene3D ABC transporter type 1, transmembrane domain 33 640 IPR036640 GO:0005524|GO:0016020
Phac3g01997 992 FunFam ABC transporter B family member 1 359 608 - -
Phac3g01997 992 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 363 607 IPR027417 -
Phac3g01997 992 MobiDBLite consensus disorder prediction 612 627 - -
Phac3g01997 992 Pfam ABC transporter transmembrane region 46 320 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Phac3g01997 992 Pfam ABC transporter transmembrane region 705 971 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Phac3g01997 992 ProSitePatterns ABC transporters family signature. 508 522 IPR017871 GO:0005524|GO:0016887
Phac3g01997 992 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 369 605 IPR003439 GO:0005524
Phac3g01997 992 SUPERFAMILY ABC transporter transmembrane region 33 351 IPR036640 GO:0005524|GO:0016020
Phac3g01997 992 SMART AAA_5 396 584 IPR003593 GO:0016887
Phac3g01997 992 FunFam ABC transporter B family member 1 684 977 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g01997 Phac-Chr3 22729371 22734772 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g01997 27 968 Calmodulin-binding Proteins AT2G36910 41.430 0.0 714
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g01997 K05658 - gmx:102660078 1532.69