Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g01994 ATGTCAGAGGATATAGACTTGAATGGAGATTCTGAGAGCAAGCAAGATTCAAAGAGAAATGCCAAAGATGAATGTGCCAAAACAGTACCCTTATACAGACTTTTCTCATTTGCTGATTCTTTTGATTGTTTATTGATGTTTGTGGGGACTGTTGGTGCTATTGCGAATGGAATCTCCCCTCCCTTGATGACTTTGTTATTTGGAAATATGATCAATGCATTTGGAGGAACCAAAAACTCCAGCGAAGTTGTTGATGAAGTTTCCAAGGTGTCTTTGGAAATTGTATACTTGGCTGTGGGAACATCTTTTGCATCACTTTTGCAGTTGACATGCTGGATGATCACTGGGGAGAGACAAGCTACAAGAATTAGAAGCTTATACCTTCAAACTATTCTGAGGCAAGATGTCACCTTCTTTGATAAGGAAACAAGAACTGGAGAGGTTGTAGGAAGGATGTCAGGAGATACTGTTCTTATTCAAGATGCCATGGGTGAGAAGGTAGGACAGTTCTTACAGTTATTGGCAGCTTCCATTGGAGGTTTTGTAATAGCATTCATCAGGGGATGGCTTCTAACTGTTGTCATGCTATCTTGTATTCCACCTGTTGTTTTGTGTGGTGCTATGGTAAGCCTGATCATTGCAAAAGCATCATCCAGGGGACAAGAAGCTTATTCCCAAGCTGCAACTGTAGTAGAGCAGACGATAGGTTCTATCCAAACTGTTGCATCATTCACTGGGGAGAAGCAAGCAATAGATAAATATAATCAGTCCTTAATCAAAGCTTACAAGGCTGGAGTGCAAGAGGCAATAGCTTCTGGTTTTGGGTTTGGTTCTCTCTCTTTTGTTTCTACCAGCAGTTATGGTTTGGCTATATGGTTTGGTGCAAAAATGATAATAGAGAAAGGATATACAGGAGGAGAGGTTGTGACAGTAATTATGGCTGTTTTGACTGGCTCCATGTCTCTTGGGCAGGCCTCTCCAAGCTTGAGTGCTTTTAGTGCTGGACAAGCTGCAGCCTTTAAGATGTTCGAAACAATTAAGAGGAAGCCAGAAATCGATGCTTATGGCACAACTGGTCGGCAGCTCGATGACATTTGTGGAGATATAGAACTAAGGGAGGTTTGTTTTAGTTATCCTACAAGACCAGACGAACTGATATTCAATGGATTTTCTCTTTCAATACCAAGCGGCACTACGATCGCTTTGGTTGGTGAAAGTGGGAGTGGGAAATCCACAGTTGTTAGTTTGATAGAGAGATTTTATGATCCACTGTCAGGTGAAGTTCTCATTGATAGTATTAACCTCAAAGAATTTCAACTGAAATGGATCAGAGAGAAAATTGGCCTAGTTAGCCAGGAACCAGTTCTCTTTACTTGTAGTATTAAAGAGAATATTGCCTATGGCAAGGATGATGCAACTATTGAAGAAATCAGAGCATCAGCAGAACTAGCTAATGCTGCCAAATTTATAGATAGGCTTCCTCAGGGACTGGACACAATGGTTGGTGAACATGGAACTCAGCTTTCTGGGGGTCAAAAGCAAAGAGTTGCAATAGCAAGAGCAATTTTGAGAGACCCAAGAATTCTACTTCTGGATGAAGCTACAAGTTCACTCGATGTTGAATCTGAGAAAATTGTACAGGAAGCATTGGACAGAATAATGATAAACCGAACAACTGTCATTGTAGCCCACCGCTTAAGTACTATAAGGAATGCTGATAGCATTGCTGTTCTTCATCATGGAAAAATAGTTGAAAGAGGTTCACATGCTGAGCTCACCGAAGATCCTAACGGAGCCTATAGCCAGCTGATTAGATTGCAAGAAATTAAAGGATCAGAACAAAATGGTGAAAATGACAGAGAGAAGCTAGAAAGTATAGTACACTCTGGCAGACAATCAAGTCAAAGATCTTTCTTAAGATCTATAAGCCAAAGATCATCAGGACTTGAAAGCAGTGGTCATAACTCATTCTCAGCATCACATGGTGTGCCAGTATCAGTTGGCTTCTCGGAACCTGCAAGAGGAGAACCTCAAACACCTCCTTCAACTTCACCACCCGAAGTACCACTCTCTCGCCTGGCATATTTAAACAAGCCAGAGATTCTAGTCTTACTTGCAGGGACTCTAGCTGCAGTAGTAAGTGGATTATTATTACCCATTAGTGCACTCTTCGTTTCCAAAATGATAAGTATTTTCTATGAGCCACATGATGAACTTCGTAAAGATTCAAAGCGTTGGGCATTACTATTTGTTGCACTTGGTGTGGTATCATTTATCACAGCTCCTTGTAGATTGTACCTTTTTGGTGTTGCTGGCGGTAAGTTGATAAAAAGGATTCGGAAAATGTGTTTTGAGAAAGTTGTTCACATGGAAGTTAGCTGGTTCGATGAAGCGGAGCATTCAAGTGGAGCAATTGGAGCGAGGCTCTCTTCTGATGCAGCTGCTGTTCGAGCTTTGGTTGGGGATGCACTTGGTTTGCTGGTTCAAAATGCTGCTACAGCTGTGGGCTGTTTAGTAATTGCATTTGAAGCAAGCTGGCAGCTTGCTTTTATAGTGCTTGCTTTGGCACCGTTATTAGGACTAAATGGATACGTGCAATTTAAGTTCATGAAAGGATTCAGTGCAGATGCAAAGAAACTGTACGAGGAAGCAAGTCAAGTCGCAAGTGATGCTGTAGGGAGTATAAGAACAGTTGCTTCTTTCTGTGCTGAAAAGAAGGTGATGGAATTGTACCAGAAAAAATGTGAAGAACCAATTAGGACAGGCATAAGGCGAGGGATAATAAGTGGAATTGGTTATGGGGTATCATTCTTCATGCTTTACGCAGTTTATGCATGCAGTTTTTATGCTGGAGCTCGACTTGTAAAGGATGGGAAAACAACATTCTCCGATGTTTTCCGTGTGCTTTTTGCCCTCAGCTTGGCAGCAATGGGAATTTCTAGATCTGGCTCTTTGGTCACTGATTCAGCTAAATCAAAAAGCGCTGCCGCTTCTGTATTTGGTGTTCTTGATCGAAAGTCACAAATTGACCCAAGTGATGACTCTGGATTCACATTGGAAGAAGTCAATGGAGAGATTGAATTTATCAATGTCAGTTTCAAGTATCCTACCAGACCTGATGTTCAAATATTCAGAGATCTTTGCTTGACTATTCATAGTGGGAAGACAGTTGCACTGGTTGGGGAAAGTGGAAGTGGAAAATCAACAGTGATCTCACTATTGCAGAGGTTTTATGATCCAGACTCAGGTCAAATTACGCTGGATGGAAAAGAAATCCAAATGATGCAAGTTAAATGGCTAAGACAACAGATGGGCCTGGTGAGCCAAGAGCCTGTGCTGTTTAATGACACCATTCGTGCAAATATTGCATATGGCAAAGGCGGGGATGCAACAGAGGCAGAAATTATAGCTGCAGCAGAACTTGCAAATGCTCATAATTTTACTAGTAGTTTGCAGGAGGTAAATTACAGTGTTCTATAA 3480 0.4141 MSEDIDLNGDSESKQDSKRNAKDECAKTVPLYRLFSFADSFDCLLMFVGTVGAIANGISPPLMTLLFGNMINAFGGTKNSSEVVDEVSKVSLEIVYLAVGTSFASLLQLTCWMITGERQATRIRSLYLQTILRQDVTFFDKETRTGEVVGRMSGDTVLIQDAMGEKVGQFLQLLAASIGGFVIAFIRGWLLTVVMLSCIPPVVLCGAMVSLIIAKASSRGQEAYSQAATVVEQTIGSIQTVASFTGEKQAIDKYNQSLIKAYKAGVQEAIASGFGFGSLSFVSTSSYGLAIWFGAKMIIEKGYTGGEVVTVIMAVLTGSMSLGQASPSLSAFSAGQAAAFKMFETIKRKPEIDAYGTTGRQLDDICGDIELREVCFSYPTRPDELIFNGFSLSIPSGTTIALVGESGSGKSTVVSLIERFYDPLSGEVLIDSINLKEFQLKWIREKIGLVSQEPVLFTCSIKENIAYGKDDATIEEIRASAELANAAKFIDRLPQGLDTMVGEHGTQLSGGQKQRVAIARAILRDPRILLLDEATSSLDVESEKIVQEALDRIMINRTTVIVAHRLSTIRNADSIAVLHHGKIVERGSHAELTEDPNGAYSQLIRLQEIKGSEQNGENDREKLESIVHSGRQSSQRSFLRSISQRSSGLESSGHNSFSASHGVPVSVGFSEPARGEPQTPPSTSPPEVPLSRLAYLNKPEILVLLAGTLAAVVSGLLLPISALFVSKMISIFYEPHDELRKDSKRWALLFVALGVVSFITAPCRLYLFGVAGGKLIKRIRKMCFEKVVHMEVSWFDEAEHSSGAIGARLSSDAAAVRALVGDALGLLVQNAATAVGCLVIAFEASWQLAFIVLALAPLLGLNGYVQFKFMKGFSADAKKLYEEASQVASDAVGSIRTVASFCAEKKVMELYQKKCEEPIRTGIRRGIISGIGYGVSFFMLYAVYACSFYAGARLVKDGKTTFSDVFRVLFALSLAAMGISRSGSLVTDSAKSKSAAASVFGVLDRKSQIDPSDDSGFTLEEVNGEIEFINVSFKYPTRPDVQIFRDLCLTIHSGKTVALVGESGSGKSTVISLLQRFYDPDSGQITLDGKEIQMMQVKWLRQQMGLVSQEPVLFNDTIRANIAYGKGGDATEAEIIAAAELANAHNFTSSLQEVNYSVL* 1160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g01994 1159 MobiDBLite consensus disorder prediction 628 659 - -
Phac3g01994 1159 FunFam ABC transporter B family member 1 359 608 - -
Phac3g01994 1159 MobiDBLite consensus disorder prediction 1 20 - -
Phac3g01994 1159 SUPERFAMILY ABC transporter transmembrane region 692 1010 IPR036640 GO:0005524|GO:0016020
Phac3g01994 1159 CDD ABC_6TM_Pgp_ABCB1_D2_like 694 1009 - -
Phac3g01994 1159 CDD ABC_MTABC3_MDL1_MDL2 369 607 - -
Phac3g01994 1159 CDD ABC_6TM_Pgp_ABCB1_D1_like 46 342 - -
Phac3g01994 1159 SMART AAA_5 1053 1157 IPR003593 GO:0016887
Phac3g01994 1159 SMART AAA_5 396 584 IPR003593 GO:0016887
Phac3g01994 1159 MobiDBLite consensus disorder prediction 611 659 - -
Phac3g01994 1159 FunFam ABC transporter B family member 1 684 992 - -
Phac3g01994 1159 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 363 607 IPR027417 -
Phac3g01994 1159 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1015 1152 IPR027417 -
Phac3g01994 1159 Gene3D - 359 608 IPR027417 -
Phac3g01994 1159 Pfam ABC transporter 388 536 IPR003439 GO:0005524
Phac3g01994 1159 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 47 334 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Phac3g01994 1159 Pfam ABC transporter transmembrane region 705 974 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Phac3g01994 1159 Pfam ABC transporter transmembrane region 46 320 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Phac3g01994 1159 PANTHER ABC TRANSPORTER B FAMILY 9 610 IPR039421 -
Phac3g01994 1159 MobiDBLite consensus disorder prediction 668 687 - -
Phac3g01994 1159 Gene3D ABC transporter type 1, transmembrane domain 33 640 IPR036640 GO:0005524|GO:0016020
Phac3g01994 1159 Gene3D - 1016 1158 IPR027417 -
Phac3g01994 1159 Gene3D ABC transporter type 1, transmembrane domain 674 1014 IPR036640 GO:0005524|GO:0016020
Phac3g01994 1159 FunFam ABC transporter B family member 9 33 365 - -
Phac3g01994 1159 FunFam ABC transporter B family member 9 993 1015 - -
Phac3g01994 1159 Pfam ABC transporter 1046 1147 IPR003439 GO:0005524
Phac3g01994 1159 MobiDBLite consensus disorder prediction 612 627 - -
Phac3g01994 1159 ProSitePatterns ABC transporters family signature. 508 522 IPR017871 GO:0005524|GO:0016887
Phac3g01994 1159 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 369 605 IPR003439 GO:0005524
Phac3g01994 1159 FunFam Cullin-associated NEDD8-dissociated protein 1 1016 1101 - -
Phac3g01994 1159 SUPERFAMILY ABC transporter transmembrane region 33 351 IPR036640 GO:0005524|GO:0016020
Phac3g01994 1159 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 705 991 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g01994 Phac-Chr3 22729371 22734772 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g01994 96 613 Calmodulin-binding Proteins AT2G36910 38.563 1.89e-103 353
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g01994 K05658 - gmx:100799760 1830.07