Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Phac3g01989 | ATGACTTCAACTGAGATGACAGCAACAAGTGATCAAACACTAGTTCAAGGGCCAAAAACTACACAAGAAAATATGGCTGGCATGAAGCAGGATTCCAAGAAAAACAAGCTGAGTAATGAAGTCAACAAAGCAGTACCCTTTTACAAACTTTTCTCATTTGCAGACTCTCAGGATTGTTTTCTGATGGTTGTTGGGGCAATAAGTGCTGTTGCTAATGGAATGTGTACGCCTTTACTGACTATATTTGCTGGAGATGCCATTGATGCCCTGGGAGGACATGTTGATGATAAACAAGTAGTTCATGAAGTCTCTAAGGTGTCTCTGAAGCTTGCATCCATAGGCGCAGGTGCCTTTTTAGCATCATTCTTGCAGGTGTCTTGCTGGGTGATCACTGGAGAGAGACAAGCAGCAAGAATAAGAAGCTTATACCTCAAAGCAATTTTGAGGCAAGATATCAGCTTCTTTGACCAGGAAACCAATAGTGGAGAGGTTGTTGGAAGGATGTCAGGTGACACAGTTCTTATTCAGGAAGCCATGGGAGAGAAGTTAGGAAAGTTCATACAAAATGTGTCAAGTTTTCTAGGAGCCATAGCCTTAGCCTTCACCAAGGGTTGGCTTCTGAGCCTTGTCCTTCTATCTTCTGTTCCTCTTCTTGTCCTCTCCGGTTCCCTGATGAGCTTAGCTTTTGCAAAGATGGCATCTCGAGGACAAGAAGCTTATTCTGAAGCAGCAACTGTTGTGGAGCAGACAATTGGATCAATTCGAACTGTTGCGTCATTTACAGGTGAGAAGCAAGCTATAGCTCAATACAATAAATACTTAACTCAAGCTTACAGAATTGCAGTGCAAGAGGGCGTGGTTAGTGGTTTTGGCTTGGGTTCACTTCAACTATTTTCGATCTGCACTTTTGCTTTGGCAATATGGTTTGGAGGGAAGATGGTACTAGAGAAAGGTTACACAGGAGGACAAGTCATTGGTGTATTTTGGGCAATAATGTCTGGTTGTTTGCGTCTGGGGCAGGCATCTCCAAGCTTAAGAGCTTTTTCCGCAGGAAAAGCTGCTGCCTTTAAAATGTTTGAAACAATAAAACGGCAGCCAGATATTGATGCTTATGACACAGACGGTCGACAGGTAGATGATATTTCGGGAGATATAGAACTTAGGGAGGTTTGCTTTTGTTATCCTTCAAGGCCAGATGAATTGATATTCAATGGATTTTCCATTTCAATATCAAGTGGCACTACTGCAGCTTTGGTTGGGAAAAGTGGAAGTGGGAAATCAACAGTTATTAGTTTGATTGAGAGATTTTATGATCCAGAAGCCGGTGAAGTTCTCATTGACGGCATCAACCTCAGAAAATTTCAATTGAAATGGATCAGACAGAAAATAGGCCTTGTCAGCCAGGAACCAGTCCTTTTTACTGGTAGCATTAAAGAAAATATTGGCTATGGTAAGGATTGGGCAACAGATGAAGAAATCAGAGCTGCAGCTGAACTTGCTAATGCTATTAACTTCATAGATGAATTTCCACATGGGCTTGACACAATGGTCGGCGAGCATGGAACTCAGCTCTCTGGAGGTCAAAAACAAAAAATATCTATAGCAAGAGCAATTCTGAAAGATCCAAGAATTCTTCTCCTTGATGAAGCCACAAGTGCTCTTGATGTAGAATCAGAGAGAGTGGTGCAAGAGACACTAGACAGAGTTATGATCAACCGAACAACTGTCATTGTAGCCCATCGCTTATGCACAATCAGGAATGCTGATATGATTGCAGTTATTCATCAAGGACAACTACAAGAAAAAGGTTCATATGCTGAACTTACTAAAGATCCTGATGGAGCTTTTAGCCAGCTCATTAGATTGCAACAAATTAGAAGGGACTCGGAACAGCATGATGCAAAGGACACAGGCCAGCAAGAAAACTTCATAGATTCTGAACAACAATTTTCTTTCCCTCTATCTTTAAGCCCAGGATCATCTGGAAGAGGAAATAACAGTCAGCAGTCGTTCAGAATGTCAAATGCCATGCCTATCACACTAGGTCTCTTTGAAACATCAGAAGAAGGGCCTGAAGTTCTTCCTTCAGCAGCTTTGCATAAGCCTCAAGAAGTTTCATTTGTCCGCATTGCTTATCTTAACAAACCTGAAATCCCAGTGTTACTCATGGGGACTCTAGCAGCAGCAGCAACTGGCGCAGTACAACCCACGATGGGGCTTCTTATTTCCCACATGATAAATACGTTCTTTGAGCCGGCAGATGAACTCCGCAAAGACTCAAATTTTTGGTCATTAATATTTGTTGCCATTAGTGTGGGTGCCTTCATATTTATTCCATTAAGGTCCTACTTCTTTGGTGTAGCTGGTTCTAAGTTGATAAAAAGGATCCGGCTAATGTGTTTTGAGAAAATAATTCACATGGAAATAGGCTGGTTTGATAAAGCTGAAAATTCAAGTGGAGTACTTGGAGCAAGGCTGTCAACTGATGCAGCTTCCATTAGAACTTTGGTTGGGGATGCTCTTGGTTTGTTGGTTCAAGATATCGCCACAGCATTCACAGCCTTGGTAATTGCCTTTGAGGCAAACTGGCAGCTTTCTCTAATCTTTCTAGTTTTGGTACCTCTAGTATTACTAAATGGATATGTACAAATGAAGTCAGTGCAAGGTTTCAGCACAGATGCAAAGAAACTATATGAGGAAGCAAGTCAAGTAGCAAATGATGCAGTAGGGAATATGAGAACAGTTGCCGCTTTCTGTGCTGAAGAGAAGGTGATGGAGTTATACCAGAAGAAATGTTTAGGACCAATCCAGACAAGTATAAGGCTAGCTTTAATCTGCGGATCAGGCTTTGGTTTATCAATCTTCTTTGTGTACGCTGTTAATGCATGCGGTTTTTATGTTGGGGCAAGACTAATTGAGAATGGCAAAGCATCATTCTCAGATTTTTTCCGTGTATTTTATGTTATCATAATGGCAGCCATAGCAATGTCACAATCTGGCTTCGTGACCCCAGCTGCCAGTAAAGCAAAATGTTCTGTTGCTTCTATATTTGCTATTCTTGATCAGAAATCAAGAATAGACCCCGGTGATGAATCTAGAATGACATTGCAAGAAGTGAAGGGAGAGATTGAGTTCCACCATGTCACTTTCAAGTATCCAACCAGGCCTAATGCTCTTGTATTCAAGGATCTTTCCTTGACTATTCATGCAGGAGAGACAGTTGCTGTAGTAGGTAAAAGTGGAAGTGGAAAGTCAACAATACTCTCATTGCTACAAAGATTTTATGACCCAGATTCAGGCCAGATTACTCTGGATGGAACAGAAGTCCACAAGCTACAACTTAAATGGTTTAGGCAGCAGATGGGGCTGGTGAACCAGGAGCCTGTGTTGTTTAATGACACCATTCGAGCCAATATTGCATACGGAAAAGGTGGTGATGCAACAGAAGCTGAAATTATAGCTGCAGCAGAACTGGCAAATGCACACAAGTTCATTAGCAGTTTGCAGCAGGGATATGATACGTTAGTGGGGGTGAGAGGGATTCAACTATCCGGAGGACAGAAGCAAAGGGTTGCCATTGCAAGATCCATAGTAAAGAGTCCAAAAATATTACTGCTAGATGAAGCCACCAGTGCACTTGATGCTGAGTCTGAAAGAATGGTTCAGGATGCACTTGACAGAGTGAGGGTGGATAGAACCACAATTGTGGTGGCTCACAGGTTATCCACCATAAAGGATGCAGATTCAATTGCAGTGGTTGAACATGGAGTGATTGCAGAGAAAGGAAAGCATGACACTTTACTCAACAAAGGTGGTACATATGCTTCCTTAGTAGCACTGCATTCTTCATAA | 3852 | 0.4193 | MTSTEMTATSDQTLVQGPKTTQENMAGMKQDSKKNKLSNEVNKAVPFYKLFSFADSQDCFLMVVGAISAVANGMCTPLLTIFAGDAIDALGGHVDDKQVVHEVSKVSLKLASIGAGAFLASFLQVSCWVITGERQAARIRSLYLKAILRQDISFFDQETNSGEVVGRMSGDTVLIQEAMGEKLGKFIQNVSSFLGAIALAFTKGWLLSLVLLSSVPLLVLSGSLMSLAFAKMASRGQEAYSEAATVVEQTIGSIRTVASFTGEKQAIAQYNKYLTQAYRIAVQEGVVSGFGLGSLQLFSICTFALAIWFGGKMVLEKGYTGGQVIGVFWAIMSGCLRLGQASPSLRAFSAGKAAAFKMFETIKRQPDIDAYDTDGRQVDDISGDIELREVCFCYPSRPDELIFNGFSISISSGTTAALVGKSGSGKSTVISLIERFYDPEAGEVLIDGINLRKFQLKWIRQKIGLVSQEPVLFTGSIKENIGYGKDWATDEEIRAAAELANAINFIDEFPHGLDTMVGEHGTQLSGGQKQKISIARAILKDPRILLLDEATSALDVESERVVQETLDRVMINRTTVIVAHRLCTIRNADMIAVIHQGQLQEKGSYAELTKDPDGAFSQLIRLQQIRRDSEQHDAKDTGQQENFIDSEQQFSFPLSLSPGSSGRGNNSQQSFRMSNAMPITLGLFETSEEGPEVLPSAALHKPQEVSFVRIAYLNKPEIPVLLMGTLAAAATGAVQPTMGLLISHMINTFFEPADELRKDSNFWSLIFVAISVGAFIFIPLRSYFFGVAGSKLIKRIRLMCFEKIIHMEIGWFDKAENSSGVLGARLSTDAASIRTLVGDALGLLVQDIATAFTALVIAFEANWQLSLIFLVLVPLVLLNGYVQMKSVQGFSTDAKKLYEEASQVANDAVGNMRTVAAFCAEEKVMELYQKKCLGPIQTSIRLALICGSGFGLSIFFVYAVNACGFYVGARLIENGKASFSDFFRVFYVIIMAAIAMSQSGFVTPAASKAKCSVASIFAILDQKSRIDPGDESRMTLQEVKGEIEFHHVTFKYPTRPNALVFKDLSLTIHAGETVAVVGKSGSGKSTILSLLQRFYDPDSGQITLDGTEVHKLQLKWFRQQMGLVNQEPVLFNDTIRANIAYGKGGDATEAEIIAAAELANAHKFISSLQQGYDTLVGVRGIQLSGGQKQRVAIARSIVKSPKILLLDEATSALDAESERMVQDALDRVRVDRTTIVVAHRLSTIKDADSIAVVEHGVIAEKGKHDTLLNKGGTYASLVALHSS* | 1284 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Phac3g01989 | 1283 | ProSitePatterns | ABC transporters family signature. | 524 | 538 | IPR017871 | GO:0005524|GO:0016887 | |
| Phac3g01989 | 1283 | Pfam | ABC transporter | 404 | 552 | IPR003439 | GO:0005524 | |
| Phac3g01989 | 1283 | Pfam | ABC transporter | 1062 | 1211 | IPR003439 | GO:0005524 | |
| Phac3g01989 | 1283 | CDD | ABC_MTABC3_MDL1_MDL2 | 385 | 623 | - | - | |
| Phac3g01989 | 1283 | Pfam | ABC transporter transmembrane region | 63 | 334 | IPR011527 | GO:0005524|GO:0016020|GO:0055085|GO:0140359 | |
| Phac3g01989 | 1283 | Pfam | ABC transporter transmembrane region | 721 | 993 | IPR011527 | GO:0005524|GO:0016020|GO:0055085|GO:0140359 | |
| Phac3g01989 | 1283 | CDD | ABC_6TM_Pgp_ABCB1_D1_like | 62 | 358 | - | - | |
| Phac3g01989 | 1283 | SMART | AAA_5 | 1070 | 1263 | IPR003593 | GO:0016887 | |
| Phac3g01989 | 1283 | SMART | AAA_5 | 412 | 584 | IPR003593 | GO:0016887 | |
| Phac3g01989 | 1283 | MobiDBLite | consensus disorder prediction | 1 | 28 | - | - | |
| Phac3g01989 | 1283 | ProSitePatterns | ABC transporters family signature. | 1183 | 1197 | IPR017871 | GO:0005524|GO:0016887 | |
| Phac3g01989 | 1283 | PANTHER | ABC TRANSPORTER B FAMILY | 27 | 623 | IPR039421 | - | |
| Phac3g01989 | 1283 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 1032 | 1279 | IPR027417 | - | |
| Phac3g01989 | 1283 | ProSiteProfiles | ATP-binding cassette, ABC transporter-type domain profile. | 1043 | 1280 | IPR003439 | GO:0005524 | |
| Phac3g01989 | 1283 | ProSiteProfiles | ATP-binding cassette, ABC transporter-type domain profile. | 385 | 621 | IPR003439 | GO:0005524 | |
| Phac3g01989 | 1283 | FunFam | ABC transporter B family member 1 | 701 | 1006 | - | - | |
| Phac3g01989 | 1283 | SUPERFAMILY | ABC transporter transmembrane region | 710 | 1027 | IPR036640 | GO:0005524|GO:0016020 | |
| Phac3g01989 | 1283 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 376 | 623 | IPR027417 | - | |
| Phac3g01989 | 1283 | Gene3D | - | 383 | 636 | IPR027417 | - | |
| Phac3g01989 | 1283 | ProSiteProfiles | ABC transporter integral membrane type-1 fused domain profile. | 63 | 350 | IPR011527 | GO:0005524|GO:0016020|GO:0055085|GO:0140359 | |
| Phac3g01989 | 1283 | FunFam | ABC transporter B family member 9 | 49 | 381 | - | - | |
| Phac3g01989 | 1283 | FunFam | Uncharacterized protein | 1007 | 1033 | - | - | |
| Phac3g01989 | 1283 | CDD | ABC_MTABC3_MDL1_MDL2 | 1043 | 1278 | - | - | |
| Phac3g01989 | 1283 | Gene3D | - | 1033 | 1283 | IPR027417 | - | |
| Phac3g01989 | 1283 | FunFam | ABC transporter B family member 1 | 1033 | 1282 | - | - | |
| Phac3g01989 | 1283 | SUPERFAMILY | ABC transporter transmembrane region | 49 | 369 | IPR036640 | GO:0005524|GO:0016020 | |
| Phac3g01989 | 1283 | Gene3D | ABC transporter type 1, transmembrane domain | 109 | 1010 | IPR036640 | GO:0005524|GO:0016020 | |
| Phac3g01989 | 1283 | FunFam | ABC transporter B family member 1 | 375 | 624 | - | - | |
| Phac3g01989 | 1283 | CDD | ABC_6TM_Pgp_ABCB1_D2_like | 711 | 1026 | - | - | |
| Phac3g01989 | 1283 | ProSiteProfiles | ABC transporter integral membrane type-1 fused domain profile. | 722 | 1008 | IPR011527 | GO:0005524|GO:0016020|GO:0055085|GO:0140359 | |
| Phac3g01989 | 1283 | MobiDBLite | consensus disorder prediction | 1 | 35 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Phac3g01989 | Phac-Chr3 | 22705901 | 22712118 | Dispersed/Tandem |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Phac3g01989 | 43 | 1281 | Calmodulin-binding Proteins | AT2G36910 | 42.008 | 0.0 | 988 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Phac3g01989 | K05658 | - | gmx:100777713 | 1971.44 |