Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g01979 ATGGAGGACAAAGTTGCATTGAAAAACTTGCTGGAAGTTCAGAAAAAGGCATCTGTTAGTAGTAAAGATGCACTGAACTGGACTCAGGAACCCTCCATTAGAACTACTCTGGGATCTACTCTTCTTGGTTTGAGGCTTAATAACTTTGAGCTTCCCCAAAATCTTGAGCAACAGCCACTGAAGCAATTGGACTTGTTGCAAATTGAGCTAGAGGAGGTGAAGAAGGAGAATCAAAATTTAAGGTCAATGCTTAATAAGATCACTGAACACTACGCTGCTCTTCAGAATCAGTTGTTGTTGGCGATGCGGCCAAAGAAACTATCTTCATCACCTCAGAATAATGAGGACATGCAGAAGGATAGCAGGCAAGATAACGTGAAGAAGCCAGTTTTACCTTCCTGGCAGTTCTTACACACTGGTAAAATGAATAACCAAGTAACACCACAAGAAGCAAAAATCATAGAAGAACAGGCATTTGAGGCTTCTTGCAAGAAAGCTAGAGTGTCCATAAGATCACGATCAGAATCTTTGAAGGGTGATGGGTGTCTATGGAGAAAATATGGACAAAAGATATCAAAGGGTAACCCTTGTCCTCGAGCCTACTATCGTTGCAACATGGGAACAGCATGTCCAGTTCGCAAGCAGGTTCAGAGGTGTGCTACTGATGAAAGTGTTATGATCACAACCTATGAAGGGAACCATAATCATTCACTCCCTCAAGCAGCCAGATCCATGGCTTGCACAACATCAGCAGCACTGACCATGTTCCTTTCTGGCTCAACCACTAGTTCACATGCCACCACTTTTTCAAATCATGACCTTTTCTCTTCACTGTCTGCTTCTACCCACTATCCATCTGCATCATCATGTCCAACTGTAACACTCGACTTAACCCAGCCCCCTAAGATCTACCCCAAATTCCCAACTGCAAGTGCTCTTTCTTCAAGCCATTCTCTAACTTTCCCTCTTTCATTGAACGGTTACCCTCAACAGTGTGAGGGATTACCCTCGGAGAAAGAGCTTCCCTTGGTGGATGTTCTTGGTGCTGCCATCACCAGGGATCCTTCTCTTAGGGCAGCATTAGAAGCAGCCGTTTCCTCTTTGGTTGGAGATTTTCAGAACATCAATAACCATGGCAAACTTAGTAGGAGTGATTATGACCCTTCTTCTAAGATGTCTGCTGAAGCTTCACAGATTTAG 1200 0.4367 MEDKVALKNLLEVQKKASVSSKDALNWTQEPSIRTTLGSTLLGLRLNNFELPQNLEQQPLKQLDLLQIELEEVKKENQNLRSMLNKITEHYAALQNQLLLAMRPKKLSSSPQNNEDMQKDSRQDNVKKPVLPSWQFLHTGKMNNQVTPQEAKIIEEQAFEASCKKARVSIRSRSESLKGDGCLWRKYGQKISKGNPCPRAYYRCNMGTACPVRKQVQRCATDESVMITTYEGNHNHSLPQAARSMACTTSAALTMFLSGSTTSSHATTFSNHDLFSSLSASTHYPSASSCPTVTLDLTQPPKIYPKFPTASALSSSHSLTFPLSLNGYPQQCEGLPSEKELPLVDVLGAAITRDPSLRAALEAAVSSLVGDFQNINNHGKLSRSDYDPSSKMSAEASQI* 400
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Phac3g01979 399 MobiDBLite consensus disorder prediction 379 399 - -
Phac3g01979 399 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 56 373 IPR044810 GO:0003700
Phac3g01979 399 SUPERFAMILY WRKY DNA-binding domain 177 239 IPR036576 GO:0003700|GO:0006355|GO:0043565
Phac3g01979 399 Gene3D WRKY domain 162 240 IPR036576 GO:0003700|GO:0006355|GO:0043565
Phac3g01979 399 ProSiteProfiles WRKY domain profile. 173 239 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phac3g01979 399 Pfam WRKY DNA -binding domain 180 236 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phac3g01979 399 Coils Coil 63 97 - -
Phac3g01979 399 SMART WRKY_cls 178 238 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phac3g01979 399 MobiDBLite consensus disorder prediction 106 125 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Phac3g01979 Phac-Chr3 22550888 22555272 Tandem
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g01979 151 299 WRKY Transcription Factor Family AT4G04450 58.065 6.11e-54 183
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Phac3g01979 WRKY 7.4e-22 CL0274
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g01979 - - pvu:PHAVU_003G124000g 728.783