Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g01978 ATGCTTAATAAGATCACTGAACACTACGCTGCTCTTCAGAATCAGTTGTTGTTGGCGATGCGGCCAAAGAAACTATCTTCATCACCTCAGAATAATGAGGACATGCAGAAGGATAGCAGGCAAGATAACGTGAAGAAGCCAGTTTTACCTTCCTGGCAGTTCTTACACACTGGTAAAATGAATAACCAAGTAACACCACAAGAAGCAAAAATCATAGAAGAACAGGCATTTGAGGCTTCTTGCAAGAAAGCTAGAGTGTCCATAAGATCACGATCAGAATCTTTGAAGGGTGATGGGTGTCTATGGAGAAAATATGGACAAAAGATATCAAAGGGTAACCCTTGTCCTCGAGCCTACTATCGTTGCAACATGGGAACAGCATGTCCAGTTCGCAAGCAGGTTCAGAGGTGTGCTACTGATGAAAGTGTTATGATCACAACCTATGAAGGGAACCATAATCATTCACTCCCTCAAGCAGCCAGATCCATGGCTTGCACAACATCAGCAGCACTGACCATGTTCCTTTCTGGCTCAACCACTAGTTCACATGCCACCACTTTTTCAAATCATGACCTTTTCTCTTCACTGTCTGCTTCTACCCACTATCCATCTGCATCATCATGTCCAACTGTAACACTCGACTTAACCCAGCCCCCTAAGATCTACCCCAAATTCCCAACTGCAAGTGCTCTTTCTTCAAGCCATTCTCTAACTTTCCCTCTTTCATTGAACGGTTACCCTCAACAGTGTGAGGGATTACCCTCGGAGAAAGAGCTTCCCTTGGTGGATGTTCTTGGTGCTGCCATCACCAGGGATCCTTCTCTTAGGGCAGCATTAGAAGCAGCCGTTTCCTCTTTGGTTGGAGATTTTCAGAACATCAATAACCATGGCAAACTTAGTAGGAGTGATTATGACCCTTCTTCTAAGATGTCTGCTGAAGCTTCACAGATTTAG 954 0.4434 MLNKITEHYAALQNQLLLAMRPKKLSSSPQNNEDMQKDSRQDNVKKPVLPSWQFLHTGKMNNQVTPQEAKIIEEQAFEASCKKARVSIRSRSESLKGDGCLWRKYGQKISKGNPCPRAYYRCNMGTACPVRKQVQRCATDESVMITTYEGNHNHSLPQAARSMACTTSAALTMFLSGSTTSSHATTFSNHDLFSSLSASTHYPSASSCPTVTLDLTQPPKIYPKFPTASALSSSHSLTFPLSLNGYPQQCEGLPSEKELPLVDVLGAAITRDPSLRAALEAAVSSLVGDFQNINNHGKLSRSDYDPSSKMSAEASQI* 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g01978 317 ProSiteProfiles WRKY domain profile. 91 157 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phac3g01978 317 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 1 291 IPR044810 GO:0003700
Phac3g01978 317 Gene3D WRKY domain 80 158 IPR036576 GO:0003700|GO:0006355|GO:0043565
Phac3g01978 317 MobiDBLite consensus disorder prediction 297 317 - -
Phac3g01978 317 Pfam WRKY DNA -binding domain 98 154 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phac3g01978 317 SUPERFAMILY WRKY DNA-binding domain 95 157 IPR036576 GO:0003700|GO:0006355|GO:0043565
Phac3g01978 317 SMART WRKY_cls 96 156 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phac3g01978 317 MobiDBLite consensus disorder prediction 24 45 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g01978 Phac-Chr3 22550888 22555272 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g01978 69 217 WRKY Transcription Factor Family AT4G04450 58.065 1.38e-54 182
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Phac3g01978 WRKY 5.2e-22 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g01978 - - pvu:PHAVU_003G124000g 590.882