Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g01972 ATGGGAACATTAGAACAAATCGATGTTCCTCATACCCAGTCATCATCATCTTCATCTTCTTCCATTGATAGCAACAACCACCCTTCTAGGACTCCACCAACCTCTTCCCCTTCATCAAGTGTCTGCAGAAAAAGAACTGATTTGAGCACTGACCTCAGACTTGGTCTTAGCATATCTCCTTCATCTCAATCTGAACCACCTTTCAATTCAACACCAAGGGAGGAAAGTTTCAACTGGCCACCAATTAAGTCCATATTGAGGAGCACCCTAGTGGGGAAACAAAGCCATCTGAGCCAAAGACCCTCTTTATTTGTCAAAGTCTACATGGAAGGCATCCCCATCGGAAGAAAATTAAATCTTATGGCACATTATAGCTATGATGGACTTGTGAAAACTCTTGGCCACATGTTTAGGACCACCATTCTGTGTCCAAACTCTCAACCACTCAATTCTGGGAATTTTCACGTGCTAACTTATGAGGATCAAGAAGGGGACTGGATGATGGTTGGAGATGTGCCGTGGGAGATGTTCTTGAACAGTGTGAAGAGGCTGAAGATCACGAGAGCTGACAGATGCTAG 579 0.4404 MGTLEQIDVPHTQSSSSSSSSIDSNNHPSRTPPTSSPSSSVCRKRTDLSTDLRLGLSISPSSQSEPPFNSTPREESFNWPPIKSILRSTLVGKQSHLSQRPSLFVKVYMEGIPIGRKLNLMAHYSYDGLVKTLGHMFRTTILCPNSQPLNSGNFHVLTYEDQEGDWMMVGDVPWEMFLNSVKRLKITRADRC* 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g01972 192 MobiDBLite consensus disorder prediction 52 76 - -
Phac3g01972 192 SUPERFAMILY CAD & PB1 domains 95 186 - -
Phac3g01972 192 Gene3D - 96 192 - -
Phac3g01972 192 ProSiteProfiles PB1 domain profile. 102 191 IPR000270 GO:0005515
Phac3g01972 192 MobiDBLite consensus disorder prediction 1 45 - -
Phac3g01972 192 MobiDBLite consensus disorder prediction 1 76 - -
Phac3g01972 192 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 48 190 IPR003311 GO:0005634|GO:0006355
Phac3g01972 192 Pfam AUX/IAA family 63 188 IPR033389 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g01972 Phac-Chr3 22475828 22477959 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g01972 106 186 B3 DNA Binding Superfamily AT4G23980 38.272 2.13e-11 60.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Phac3g01972 AUX_IAA 7.5e-33 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g01972 K14484 - gmx:100818083 329.717